Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc116Q80X53 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc116Q80X53 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc116Q80X53 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Ccdc116Q80X53 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc116Q80X53 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc116Q80X53 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc116Q80X53 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc116Q80X53 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.64■□□□□ 0.09
Ccdc116Q80X53 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc116Q80X53 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc116Q80X53 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc116Q80X53 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc116Q80X53 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc116Q80X53 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc116Q80X53 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc116Q80X53 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc116Q80X53 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc116Q80X53 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc116Q80X53 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc116Q80X53 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc116Q80X53 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc116Q80X53 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Gm29518-201ENSMUST00000190858 372 ntBASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Gm17808-201ENSMUST00000200859 894 ntBASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc116Q80X53 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc116Q80X53 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc116Q80X53 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc116Q80X53 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc116Q80X53 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc116Q80X53 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc116Q80X53 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc116Q80X53 Gm15794-201ENSMUST00000120182 631 ntBASIC15.62■□□□□ 0.09
Ccdc116Q80X53 Gm11950-201ENSMUST00000121615 838 ntBASIC15.62■□□□□ 0.09
Ccdc116Q80X53 Gm6659-201ENSMUST00000174752 547 ntBASIC15.62■□□□□ 0.09
Ccdc116Q80X53 Gm23634-201ENSMUST00000175071 91 ntBASIC15.62■□□□□ 0.09
Ccdc116Q80X53 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.62■□□□□ 0.09
Ccdc116Q80X53 Mir7071-201ENSMUST00000184847 69 ntBASIC15.62■□□□□ 0.09
Ccdc116Q80X53 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc116Q80X53 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc116Q80X53 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc116Q80X53 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc116Q80X53 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Ccdc116Q80X53 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc116Q80X53 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc116Q80X53 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc116Q80X53 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc116Q80X53 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc116Q80X53 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc116Q80X53 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc116Q80X53 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.61■□□□□ 0.09
Ccdc116Q80X53 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc116Q80X53 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc116Q80X53 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms