Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim62Q80V85 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trim62Q80V85 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim62Q80V85 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim62Q80V85 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim62Q80V85 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim62Q80V85 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trim62Q80V85 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim62Q80V85 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim62Q80V85 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim62Q80V85 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim62Q80V85 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.49■□□□□ 0.23
Trim62Q80V85 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
Trim62Q80V85 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim62Q80V85 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim62Q80V85 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.49■□□□□ 0.23
Trim62Q80V85 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim62Q80V85 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim62Q80V85 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim62Q80V85 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Trim62Q80V85 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.49■□□□□ 0.23
Trim62Q80V85 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trim62Q80V85 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.49■□□□□ 0.23
Trim62Q80V85 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.49■□□□□ 0.23
Trim62Q80V85 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.49■□□□□ 0.23
Trim62Q80V85 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.49■□□□□ 0.23
Trim62Q80V85 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.49■□□□□ 0.23
Trim62Q80V85 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.49■□□□□ 0.23
Trim62Q80V85 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.49■□□□□ 0.23
Trim62Q80V85 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.49■□□□□ 0.23
Trim62Q80V85 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.49■□□□□ 0.23
Trim62Q80V85 Gm8825-201ENSMUST00000182565 998 ntBASIC16.49■□□□□ 0.23
Trim62Q80V85 Gm4518-201ENSMUST00000182638 718 ntBASIC16.49■□□□□ 0.23
Trim62Q80V85 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.49■□□□□ 0.23
Trim62Q80V85 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.49■□□□□ 0.23
Trim62Q80V85 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.49■□□□□ 0.23
Trim62Q80V85 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Trim62Q80V85 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.49■□□□□ 0.23
Trim62Q80V85 Gm8655-201ENSMUST00000221159 852 ntBASIC16.49■□□□□ 0.23
Trim62Q80V85 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.49■□□□□ 0.23
Trim62Q80V85 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim62Q80V85 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trim62Q80V85 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.49■□□□□ 0.23
Trim62Q80V85 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.49■□□□□ 0.23
Trim62Q80V85 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim62Q80V85 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim62Q80V85 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim62Q80V85 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim62Q80V85 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim62Q80V85 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Trim62Q80V85 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim62Q80V85 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim62Q80V85 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim62Q80V85 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim62Q80V85 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim62Q80V85 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim62Q80V85 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim62Q80V85 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim62Q80V85 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trim62Q80V85 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim62Q80V85 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim62Q80V85 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim62Q80V85 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim62Q80V85 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim62Q80V85 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Trim62Q80V85 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim62Q80V85 Gm4459-201ENSMUST00000118750 468 ntBASIC16.48■□□□□ 0.23
Trim62Q80V85 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim62Q80V85 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Trim62Q80V85 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim62Q80V85 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim62Q80V85 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.48■□□□□ 0.23
Trim62Q80V85 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim62Q80V85 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim62Q80V85 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim62Q80V85 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.48■□□□□ 0.23
Trim62Q80V85 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim62Q80V85 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trim62Q80V85 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim62Q80V85 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim62Q80V85 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim62Q80V85 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim62Q80V85 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim62Q80V85 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim62Q80V85 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim62Q80V85 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Trim62Q80V85 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim62Q80V85 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim62Q80V85 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.47■□□□□ 0.23
Trim62Q80V85 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim62Q80V85 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.47■□□□□ 0.23
Trim62Q80V85 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim62Q80V85 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim62Q80V85 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim62Q80V85 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim62Q80V85 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.47■□□□□ 0.23
Trim62Q80V85 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim62Q80V85 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim62Q80V85 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim62Q80V85 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms