Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf38bQ80SY5 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf38bQ80SY5 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf38bQ80SY5 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf38bQ80SY5 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf38bQ80SY5 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.66■□□□□ 0.26
Prpf38bQ80SY5 Gm4995-201ENSMUST00000117247 432 ntBASIC16.66■□□□□ 0.26
Prpf38bQ80SY5 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.66■□□□□ 0.26
Prpf38bQ80SY5 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf38bQ80SY5 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.66■□□□□ 0.26
Prpf38bQ80SY5 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf38bQ80SY5 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf38bQ80SY5 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Prpf38bQ80SY5 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf38bQ80SY5 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.66■□□□□ 0.26
Prpf38bQ80SY5 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Prpf38bQ80SY5 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf38bQ80SY5 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf38bQ80SY5 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf38bQ80SY5 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf38bQ80SY5 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf38bQ80SY5 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf38bQ80SY5 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Prpf38bQ80SY5 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf38bQ80SY5 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf38bQ80SY5 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.65■□□□□ 0.26
Prpf38bQ80SY5 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf38bQ80SY5 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf38bQ80SY5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf38bQ80SY5 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.65■□□□□ 0.26
Prpf38bQ80SY5 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.65■□□□□ 0.26
Prpf38bQ80SY5 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.65■□□□□ 0.26
Prpf38bQ80SY5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf38bQ80SY5 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.65■□□□□ 0.26
Prpf38bQ80SY5 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf38bQ80SY5 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf38bQ80SY5 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Prpf38bQ80SY5 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf38bQ80SY5 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Prpf38bQ80SY5 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf38bQ80SY5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Prpf38bQ80SY5 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Prpf38bQ80SY5 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 Gm11025-201ENSMUST00000140773 466 ntBASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf38bQ80SY5 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms