Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sned1Q70E20 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sned1Q70E20 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sned1Q70E20 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sned1Q70E20 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sned1Q70E20 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sned1Q70E20 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Sned1Q70E20 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sned1Q70E20 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC19.17■□□□□ 0.66
Sned1Q70E20 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC19.17■□□□□ 0.66
Sned1Q70E20 Gm2272-201ENSMUST00000194903 582 ntBASIC19.17■□□□□ 0.66
Sned1Q70E20 AC130829.1-201ENSMUST00000221548 494 ntBASIC19.17■□□□□ 0.66
Sned1Q70E20 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sned1Q70E20 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sned1Q70E20 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sned1Q70E20 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sned1Q70E20 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sned1Q70E20 AC025913.2-201ENSMUST00000220136 1766 ntBASIC19.17■□□□□ 0.66
Sned1Q70E20 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
Sned1Q70E20 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sned1Q70E20 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sned1Q70E20 Gm13453-201ENSMUST00000118708 357 ntBASIC19.17■□□□□ 0.66
Sned1Q70E20 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC19.17■□□□□ 0.66
Sned1Q70E20 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Sned1Q70E20 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sned1Q70E20 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC19.17■□□□□ 0.66
Sned1Q70E20 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sned1Q70E20 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sned1Q70E20 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sned1Q70E20 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sned1Q70E20 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sned1Q70E20 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sned1Q70E20 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sned1Q70E20 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sned1Q70E20 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sned1Q70E20 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
Sned1Q70E20 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.16■□□□□ 0.66
Sned1Q70E20 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.16■□□□□ 0.66
Sned1Q70E20 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sned1Q70E20 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC19.16■□□□□ 0.66
Sned1Q70E20 Gm27989-201ENSMUST00000184721 107 ntBASIC19.16■□□□□ 0.66
Sned1Q70E20 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sned1Q70E20 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Sned1Q70E20 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sned1Q70E20 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC19.16■□□□□ 0.66
Sned1Q70E20 Gm10154-201ENSMUST00000084445 354 ntBASIC19.16■□□□□ 0.66
Sned1Q70E20 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sned1Q70E20 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sned1Q70E20 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sned1Q70E20 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sned1Q70E20 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sned1Q70E20 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sned1Q70E20 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Sned1Q70E20 Gm7488-201ENSMUST00000117148 684 ntBASIC19.15■□□□□ 0.66
Sned1Q70E20 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sned1Q70E20 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sned1Q70E20 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC19.15■□□□□ 0.66
Sned1Q70E20 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sned1Q70E20 Gm17837-201ENSMUST00000186435 985 ntBASIC19.15■□□□□ 0.66
Sned1Q70E20 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC19.15■□□□□ 0.66
Sned1Q70E20 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sned1Q70E20 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.66
Sned1Q70E20 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Sned1Q70E20 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sned1Q70E20 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sned1Q70E20 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sned1Q70E20 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Sned1Q70E20 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sned1Q70E20 Gm2810-201ENSMUST00000118681 990 ntBASIC19.14■□□□□ 0.65
Sned1Q70E20 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Sned1Q70E20 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sned1Q70E20 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.14■□□□□ 0.65
Sned1Q70E20 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.13■□□□□ 0.65
Sned1Q70E20 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sned1Q70E20 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sned1Q70E20 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sned1Q70E20 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sned1Q70E20 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sned1Q70E20 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sned1Q70E20 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sned1Q70E20 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC19.13■□□□□ 0.65
Sned1Q70E20 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Sned1Q70E20 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Sned1Q70E20 Gm7730-201ENSMUST00000212486 454 ntBASIC19.13■□□□□ 0.65
Sned1Q70E20 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sned1Q70E20 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.13■□□□□ 0.65
Sned1Q70E20 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sned1Q70E20 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sned1Q70E20 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.12■□□□□ 0.65
Sned1Q70E20 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sned1Q70E20 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sned1Q70E20 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Sned1Q70E20 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sned1Q70E20 Gm29541-201ENSMUST00000191351 678 ntBASIC19.12■□□□□ 0.65
Sned1Q70E20 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Sned1Q70E20 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Sned1Q70E20 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sned1Q70E20 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.12■□□□□ 0.65
Sned1Q70E20 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.12■□□□□ 0.65
Sned1Q70E20 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms