Protein–RNA interactions for Protein: Q6X893

Slc44a1, Choline transporter-like protein 1, mousemouse

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1Q6X893 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc44a1Q6X893 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc44a1Q6X893 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.51■□□□□ 0.55
Slc44a1Q6X893 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.51■□□□□ 0.55
Slc44a1Q6X893 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc44a1Q6X893 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc44a1Q6X893 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.51■□□□□ 0.55
Slc44a1Q6X893 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slc44a1Q6X893 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc44a1Q6X893 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slc44a1Q6X893 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc44a1Q6X893 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc44a1Q6X893 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc44a1Q6X893 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc44a1Q6X893 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Slc44a1Q6X893 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc44a1Q6X893 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.5■□□□□ 0.55
Slc44a1Q6X893 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc44a1Q6X893 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc44a1Q6X893 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.5■□□□□ 0.55
Slc44a1Q6X893 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Slc44a1Q6X893 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc44a1Q6X893 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc44a1Q6X893 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Slc44a1Q6X893 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.5■□□□□ 0.55
Slc44a1Q6X893 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slc44a1Q6X893 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Slc44a1Q6X893 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc44a1Q6X893 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc44a1Q6X893 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Slc44a1Q6X893 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc44a1Q6X893 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Slc44a1Q6X893 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Slc44a1Q6X893 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.49■□□□□ 0.55
Slc44a1Q6X893 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc44a1Q6X893 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc44a1Q6X893 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc44a1Q6X893 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Slc44a1Q6X893 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.49■□□□□ 0.55
Slc44a1Q6X893 Gm8655-201ENSMUST00000221159 852 ntBASIC18.49■□□□□ 0.55
Slc44a1Q6X893 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Slc44a1Q6X893 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Slc44a1Q6X893 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc44a1Q6X893 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Slc44a1Q6X893 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc44a1Q6X893 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Slc44a1Q6X893 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc44a1Q6X893 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Gm44357-201ENSMUST00000195897 142 ntBASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Gm19658-201ENSMUST00000196231 138 ntBASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Gm44367-201ENSMUST00000196836 138 ntBASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Gm44350-201ENSMUST00000197197 138 ntBASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Gm44390-201ENSMUST00000197533 144 ntBASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Gm44313-201ENSMUST00000198018 138 ntBASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Gm44486-201ENSMUST00000198508 138 ntBASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Gm44314-201ENSMUST00000199263 138 ntBASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Gm44394-201ENSMUST00000199558 138 ntBASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Gm44484-201ENSMUST00000199873 138 ntBASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Gm44466-201ENSMUST00000200264 138 ntBASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Gm44359-201ENSMUST00000200671 138 ntBASIC18.48■□□□□ 0.55
Slc44a1Q6X893 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.48■□□□□ 0.55
Slc44a1Q6X893 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.48■□□□□ 0.55
Slc44a1Q6X893 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc44a1Q6X893 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc44a1Q6X893 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc44a1Q6X893 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc44a1Q6X893 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc44a1Q6X893 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc44a1Q6X893 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slc44a1Q6X893 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc44a1Q6X893 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slc44a1Q6X893 Gm8097-201ENSMUST00000117903 829 ntBASIC18.47■□□□□ 0.55
Slc44a1Q6X893 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.47■□□□□ 0.55
Slc44a1Q6X893 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.47■□□□□ 0.55
Slc44a1Q6X893 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.47■□□□□ 0.55
Slc44a1Q6X893 Gm18622-201ENSMUST00000219361 595 ntBASIC18.47■□□□□ 0.55
Slc44a1Q6X893 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc44a1Q6X893 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slc44a1Q6X893 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slc44a1Q6X893 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc44a1Q6X893 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc44a1Q6X893 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc44a1Q6X893 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc44a1Q6X893 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc44a1Q6X893 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc44a1Q6X893 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms