Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.1■□□□□ 0.65
Npc1l1Q6T3U4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Npc1l1Q6T3U4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Npc1l1Q6T3U4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
Npc1l1Q6T3U4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Gm6257-201ENSMUST00000163864 910 ntBASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1l1Q6T3U4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Npc1l1Q6T3U4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Npc1l1Q6T3U4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Npc1l1Q6T3U4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Npc1l1Q6T3U4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Npc1l1Q6T3U4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Npc1l1Q6T3U4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Npc1l1Q6T3U4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Npc1l1Q6T3U4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.08■□□□□ 0.65
Npc1l1Q6T3U4 Gm15467-201ENSMUST00000120582 445 ntBASIC19.08■□□□□ 0.65
Npc1l1Q6T3U4 Gm11780-201ENSMUST00000136880 516 ntBASIC19.08■□□□□ 0.65
Npc1l1Q6T3U4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Npc1l1Q6T3U4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.08■□□□□ 0.65
Npc1l1Q6T3U4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.08■□□□□ 0.65
Npc1l1Q6T3U4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Npc1l1Q6T3U4 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Npc1l1Q6T3U4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Npc1l1Q6T3U4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Npc1l1Q6T3U4 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Npc1l1Q6T3U4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Npc1l1Q6T3U4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Npc1l1Q6T3U4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Npc1l1Q6T3U4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Npc1l1Q6T3U4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Npc1l1Q6T3U4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Npc1l1Q6T3U4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Npc1l1Q6T3U4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Npc1l1Q6T3U4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Npc1l1Q6T3U4 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Npc1l1Q6T3U4 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Npc1l1Q6T3U4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Npc1l1Q6T3U4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Npc1l1Q6T3U4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Npc1l1Q6T3U4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Npc1l1Q6T3U4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Npc1l1Q6T3U4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Npc1l1Q6T3U4 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.07■□□□□ 0.64
Npc1l1Q6T3U4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Npc1l1Q6T3U4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Npc1l1Q6T3U4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Npc1l1Q6T3U4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Npc1l1Q6T3U4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Npc1l1Q6T3U4 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Npc1l1Q6T3U4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.06■□□□□ 0.64
Npc1l1Q6T3U4 Gm27702-201ENSMUST00000184512 56 ntBASIC19.06■□□□□ 0.64
Npc1l1Q6T3U4 Gm6089-201ENSMUST00000197666 938 ntBASIC19.06■□□□□ 0.64
Npc1l1Q6T3U4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC19.06■□□□□ 0.64
Npc1l1Q6T3U4 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19.06■□□□□ 0.64
Npc1l1Q6T3U4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.06■□□□□ 0.64
Npc1l1Q6T3U4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Npc1l1Q6T3U4 AC154222.1-201ENSMUST00000223882 475 ntBASIC19.06■□□□□ 0.64
Npc1l1Q6T3U4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.06■□□□□ 0.64
Npc1l1Q6T3U4 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Npc1l1Q6T3U4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Npc1l1Q6T3U4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Npc1l1Q6T3U4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Npc1l1Q6T3U4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Npc1l1Q6T3U4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Npc1l1Q6T3U4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Npc1l1Q6T3U4 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Npc1l1Q6T3U4 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Npc1l1Q6T3U4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Npc1l1Q6T3U4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Npc1l1Q6T3U4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Npc1l1Q6T3U4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Npc1l1Q6T3U4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Npc1l1Q6T3U4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Npc1l1Q6T3U4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Npc1l1Q6T3U4 Gm12260-201ENSMUST00000122447 411 ntBASIC19.05■□□□□ 0.64
Npc1l1Q6T3U4 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms