Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Haglr-201ENSMUST00000100000 2085 ntBASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn10aQ6QIY3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn10aQ6QIY3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn10aQ6QIY3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scn10aQ6QIY3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn10aQ6QIY3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn10aQ6QIY3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn10aQ6QIY3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn10aQ6QIY3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Scn10aQ6QIY3 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.96■□□□□ 0.47
Scn10aQ6QIY3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn10aQ6QIY3 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.96■□□□□ 0.47
Scn10aQ6QIY3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.96■□□□□ 0.47
Scn10aQ6QIY3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn10aQ6QIY3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.96■□□□□ 0.47
Scn10aQ6QIY3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn10aQ6QIY3 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.96■□□□□ 0.47
Scn10aQ6QIY3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scn10aQ6QIY3 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.96■□□□□ 0.47
Scn10aQ6QIY3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn10aQ6QIY3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Scn10aQ6QIY3 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.95■□□□□ 0.46
Scn10aQ6QIY3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Scn10aQ6QIY3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scn10aQ6QIY3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.95■□□□□ 0.46
Scn10aQ6QIY3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn10aQ6QIY3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scn10aQ6QIY3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn10aQ6QIY3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn10aQ6QIY3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Scn10aQ6QIY3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn10aQ6QIY3 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Scn10aQ6QIY3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Scn10aQ6QIY3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scn10aQ6QIY3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.95■□□□□ 0.46
Scn10aQ6QIY3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Scn10aQ6QIY3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scn10aQ6QIY3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn10aQ6QIY3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.95■□□□□ 0.46
Scn10aQ6QIY3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scn10aQ6QIY3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Scn10aQ6QIY3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn10aQ6QIY3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn10aQ6QIY3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn10aQ6QIY3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Scn10aQ6QIY3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn10aQ6QIY3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn10aQ6QIY3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Scn10aQ6QIY3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn10aQ6QIY3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn10aQ6QIY3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Scn10aQ6QIY3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Scn10aQ6QIY3 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.94■□□□□ 0.46
Scn10aQ6QIY3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn10aQ6QIY3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn10aQ6QIY3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn10aQ6QIY3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Scn10aQ6QIY3 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn10aQ6QIY3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn10aQ6QIY3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn10aQ6QIY3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Gm38294-201ENSMUST00000192831 381 ntBASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Gm10154-201ENSMUST00000084445 354 ntBASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Grk6-207ENSMUST00000225925 2769 ntBASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Gm2272-201ENSMUST00000194903 582 ntBASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.93■□□□□ 0.46
Scn10aQ6QIY3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn10aQ6QIY3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn10aQ6QIY3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn10aQ6QIY3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms