Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim45Q6PFY8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim45Q6PFY8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trim45Q6PFY8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim45Q6PFY8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim45Q6PFY8 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.17■□□□□ 0.02
Trim45Q6PFY8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim45Q6PFY8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim45Q6PFY8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim45Q6PFY8 Olfr129-201ENSMUST00000122318 993 ntBASIC15.17■□□□□ 0.02
Trim45Q6PFY8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim45Q6PFY8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trim45Q6PFY8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.17■□□□□ 0.02
Trim45Q6PFY8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim45Q6PFY8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim45Q6PFY8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim45Q6PFY8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim45Q6PFY8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim45Q6PFY8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim45Q6PFY8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trim45Q6PFY8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim45Q6PFY8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim45Q6PFY8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.16■□□□□ 0.02
Trim45Q6PFY8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim45Q6PFY8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim45Q6PFY8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim45Q6PFY8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim45Q6PFY8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trim45Q6PFY8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim45Q6PFY8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim45Q6PFY8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim45Q6PFY8 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.16■□□□□ 0.02
Trim45Q6PFY8 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trim45Q6PFY8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim45Q6PFY8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Trim45Q6PFY8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim45Q6PFY8 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.15■□□□□ 0.02
Trim45Q6PFY8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim45Q6PFY8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim45Q6PFY8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim45Q6PFY8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim45Q6PFY8 Gm17971-201ENSMUST00000190239 806 ntBASIC15.15■□□□□ 0.02
Trim45Q6PFY8 Gm18421-201ENSMUST00000204122 625 ntBASIC15.15■□□□□ 0.02
Trim45Q6PFY8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trim45Q6PFY8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim45Q6PFY8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.15■□□□□ 0.02
Trim45Q6PFY8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim45Q6PFY8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim45Q6PFY8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Trim45Q6PFY8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim45Q6PFY8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim45Q6PFY8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim45Q6PFY8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Gm27741-201ENSMUST00000185060 237 ntBASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trim45Q6PFY8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim45Q6PFY8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim45Q6PFY8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim45Q6PFY8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim45Q6PFY8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trim45Q6PFY8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim45Q6PFY8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim45Q6PFY8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim45Q6PFY8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Trim45Q6PFY8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim45Q6PFY8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Trim45Q6PFY8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim45Q6PFY8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim45Q6PFY8 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.13■□□□□ 0.01
Trim45Q6PFY8 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms