Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ecm1Q61508 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.63■□□□□ 0.41
Ecm1Q61508 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ecm1Q61508 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ecm1Q61508 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.63■□□□□ 0.41
Ecm1Q61508 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ecm1Q61508 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ecm1Q61508 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ecm1Q61508 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.62■□□□□ 0.41
Ecm1Q61508 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.62■□□□□ 0.41
Ecm1Q61508 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ecm1Q61508 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
Ecm1Q61508 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.62■□□□□ 0.41
Ecm1Q61508 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ecm1Q61508 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Ecm1Q61508 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ecm1Q61508 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ecm1Q61508 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.62■□□□□ 0.41
Ecm1Q61508 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.62■□□□□ 0.41
Ecm1Q61508 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ecm1Q61508 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ecm1Q61508 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ecm1Q61508 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ecm1Q61508 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ecm1Q61508 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ecm1Q61508 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ecm1Q61508 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ecm1Q61508 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ecm1Q61508 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ecm1Q61508 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ecm1Q61508 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ecm1Q61508 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ecm1Q61508 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
Ecm1Q61508 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.61■□□□□ 0.41
Ecm1Q61508 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.61■□□□□ 0.41
Ecm1Q61508 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.61■□□□□ 0.41
Ecm1Q61508 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ecm1Q61508 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.61■□□□□ 0.41
Ecm1Q61508 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ecm1Q61508 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ecm1Q61508 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ecm1Q61508 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ecm1Q61508 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ecm1Q61508 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ecm1Q61508 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ecm1Q61508 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ecm1Q61508 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ecm1Q61508 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ecm1Q61508 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ecm1Q61508 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ecm1Q61508 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Ecm1Q61508 Gm27494-201ENSMUST00000184735 189 ntBASIC17.6■□□□□ 0.41
Ecm1Q61508 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.6■□□□□ 0.41
Ecm1Q61508 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ecm1Q61508 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.6■□□□□ 0.41
Ecm1Q61508 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.6■□□□□ 0.41
Ecm1Q61508 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ecm1Q61508 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ecm1Q61508 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.6■□□□□ 0.41
Ecm1Q61508 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ecm1Q61508 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ecm1Q61508 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ecm1Q61508 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ecm1Q61508 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Ecm1Q61508 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ecm1Q61508 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ecm1Q61508 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ecm1Q61508 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.59■□□□□ 0.41
Ecm1Q61508 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.59■□□□□ 0.41
Ecm1Q61508 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ecm1Q61508 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ecm1Q61508 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ecm1Q61508 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ecm1Q61508 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ecm1Q61508 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ecm1Q61508 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ecm1Q61508 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ecm1Q61508 Mir1895-201ENSMUST00000122615 79 ntBASIC17.59■□□□□ 0.41
Ecm1Q61508 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.59■□□□□ 0.41
Ecm1Q61508 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.59■□□□□ 0.41
Ecm1Q61508 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.59■□□□□ 0.41
Ecm1Q61508 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.59■□□□□ 0.41
Ecm1Q61508 Gm45747-201ENSMUST00000212203 999 ntBASIC17.59■□□□□ 0.41
Ecm1Q61508 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ecm1Q61508 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
Ecm1Q61508 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ecm1Q61508 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ecm1Q61508 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ecm1Q61508 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ecm1Q61508 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.59■□□□□ 0.41
Ecm1Q61508 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ecm1Q61508 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ecm1Q61508 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ecm1Q61508 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ecm1Q61508 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ecm1Q61508 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ecm1Q61508 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ecm1Q61508 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.58■□□□□ 0.4
Ecm1Q61508 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ecm1Q61508 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms