Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clns1aQ61189 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
Clns1aQ61189 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clns1aQ61189 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.71□□□□□ -0.21
Clns1aQ61189 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.71□□□□□ -0.21
Clns1aQ61189 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.71□□□□□ -0.21
Clns1aQ61189 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clns1aQ61189 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clns1aQ61189 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clns1aQ61189 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Clns1aQ61189 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.71□□□□□ -0.21
Clns1aQ61189 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clns1aQ61189 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Clns1aQ61189 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Clns1aQ61189 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Clns1aQ61189 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Clns1aQ61189 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clns1aQ61189 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Clns1aQ61189 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Clns1aQ61189 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clns1aQ61189 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clns1aQ61189 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Clns1aQ61189 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clns1aQ61189 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clns1aQ61189 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clns1aQ61189 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clns1aQ61189 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Clns1aQ61189 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clns1aQ61189 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.7□□□□□ -0.22
Clns1aQ61189 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clns1aQ61189 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clns1aQ61189 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clns1aQ61189 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clns1aQ61189 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clns1aQ61189 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Clns1aQ61189 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clns1aQ61189 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clns1aQ61189 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Clns1aQ61189 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clns1aQ61189 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clns1aQ61189 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clns1aQ61189 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clns1aQ61189 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Clns1aQ61189 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Clns1aQ61189 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clns1aQ61189 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clns1aQ61189 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clns1aQ61189 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.69□□□□□ -0.22
Clns1aQ61189 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clns1aQ61189 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clns1aQ61189 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clns1aQ61189 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.69□□□□□ -0.22
Clns1aQ61189 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clns1aQ61189 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clns1aQ61189 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clns1aQ61189 Gm12933-201ENSMUST00000120203 872 ntBASIC13.69□□□□□ -0.22
Clns1aQ61189 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clns1aQ61189 Gm43183-201ENSMUST00000200632 547 ntBASIC13.69□□□□□ -0.22
Clns1aQ61189 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clns1aQ61189 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.69□□□□□ -0.22
Clns1aQ61189 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clns1aQ61189 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clns1aQ61189 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clns1aQ61189 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clns1aQ61189 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clns1aQ61189 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clns1aQ61189 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clns1aQ61189 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clns1aQ61189 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clns1aQ61189 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clns1aQ61189 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clns1aQ61189 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clns1aQ61189 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clns1aQ61189 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Clns1aQ61189 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Clns1aQ61189 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Clns1aQ61189 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.68□□□□□ -0.22
Clns1aQ61189 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.68□□□□□ -0.22
Clns1aQ61189 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Clns1aQ61189 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Clns1aQ61189 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Clns1aQ61189 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.68□□□□□ -0.22
Clns1aQ61189 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Clns1aQ61189 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms