Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
Ptch1Q61115 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ptch1Q61115 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ptch1Q61115 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Ptch1Q61115 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ptch1Q61115 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC22.88■■□□□ 1.25
Ptch1Q61115 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ptch1Q61115 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ptch1Q61115 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ptch1Q61115 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC22.88■■□□□ 1.25
Ptch1Q61115 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ptch1Q61115 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC22.88■■□□□ 1.25
Ptch1Q61115 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
Ptch1Q61115 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ptch1Q61115 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ptch1Q61115 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ptch1Q61115 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Ptch1Q61115 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ptch1Q61115 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Ptch1Q61115 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ptch1Q61115 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ptch1Q61115 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC22.87■■□□□ 1.25
Ptch1Q61115 Gm7653-201ENSMUST00000214567 508 ntBASIC22.87■■□□□ 1.25
Ptch1Q61115 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Ptch1Q61115 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ptch1Q61115 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ptch1Q61115 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ptch1Q61115 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ptch1Q61115 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Ptch1Q61115 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ptch1Q61115 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Ptch1Q61115 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Ptch1Q61115 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Ptch1Q61115 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC22.86■■□□□ 1.25
Ptch1Q61115 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ptch1Q61115 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Ptch1Q61115 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ptch1Q61115 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC22.86■■□□□ 1.25
Ptch1Q61115 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ptch1Q61115 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ptch1Q61115 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
Ptch1Q61115 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
Ptch1Q61115 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ptch1Q61115 Gm6415-201ENSMUST00000118488 348 ntBASIC22.86■■□□□ 1.25
Ptch1Q61115 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
Ptch1Q61115 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ptch1Q61115 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC22.86■■□□□ 1.25
Ptch1Q61115 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ptch1Q61115 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ptch1Q61115 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ptch1Q61115 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ptch1Q61115 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Ptch1Q61115 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ptch1Q61115 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ptch1Q61115 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ptch1Q61115 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Ptch1Q61115 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ptch1Q61115 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ptch1Q61115 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ptch1Q61115 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
Ptch1Q61115 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC22.85■■□□□ 1.25
Ptch1Q61115 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ptch1Q61115 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC22.85■■□□□ 1.25
Ptch1Q61115 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC22.85■■□□□ 1.25
Ptch1Q61115 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ptch1Q61115 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Ptch1Q61115 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ptch1Q61115 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ptch1Q61115 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ptch1Q61115 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ptch1Q61115 AC124392.1-201ENSMUST00000225172 5324 ntBASIC22.85■■□□□ 1.25
Ptch1Q61115 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ptch1Q61115 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ptch1Q61115 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ptch1Q61115 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC22.85■■□□□ 1.25
Ptch1Q61115 Gm11841-201ENSMUST00000117060 1963 ntBASIC22.84■■□□□ 1.25
Ptch1Q61115 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC22.84■■□□□ 1.25
Ptch1Q61115 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ptch1Q61115 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ptch1Q61115 Gm14127-201ENSMUST00000117906 678 ntBASIC22.84■■□□□ 1.25
Ptch1Q61115 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ptch1Q61115 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC22.84■■□□□ 1.25
Ptch1Q61115 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
Ptch1Q61115 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ptch1Q61115 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ptch1Q61115 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ptch1Q61115 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ptch1Q61115 AC025913.2-201ENSMUST00000220136 1766 ntBASIC22.84■■□□□ 1.25
Ptch1Q61115 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ptch1Q61115 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ptch1Q61115 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ptch1Q61115 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ptch1Q61115 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ptch1Q61115 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ptch1Q61115 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ptch1Q61115 Gm6973-201ENSMUST00000117080 721 ntBASIC22.83■■□□□ 1.25
Ptch1Q61115 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Ptch1Q61115 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Ptch1Q61115 Mir7684-201ENSMUST00000183858 60 ntBASIC22.83■■□□□ 1.25
Ptch1Q61115 Mir8102-201ENSMUST00000184148 139 ntBASIC22.83■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms