Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdf4Q61112 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdf4Q61112 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Sdf4Q61112 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdf4Q61112 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdf4Q61112 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sdf4Q61112 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sdf4Q61112 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdf4Q61112 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.2■□□□□ 0.18
Sdf4Q61112 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdf4Q61112 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sdf4Q61112 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdf4Q61112 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdf4Q61112 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdf4Q61112 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdf4Q61112 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.2■□□□□ 0.18
Sdf4Q61112 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdf4Q61112 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdf4Q61112 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdf4Q61112 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdf4Q61112 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdf4Q61112 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdf4Q61112 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sdf4Q61112 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Sdf4Q61112 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdf4Q61112 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdf4Q61112 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sdf4Q61112 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdf4Q61112 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sdf4Q61112 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdf4Q61112 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdf4Q61112 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sdf4Q61112 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdf4Q61112 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sdf4Q61112 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Sdf4Q61112 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.19■□□□□ 0.18
Sdf4Q61112 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sdf4Q61112 Mir3081-201ENSMUST00000175305 84 ntBASIC16.19■□□□□ 0.18
Sdf4Q61112 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdf4Q61112 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.19■□□□□ 0.18
Sdf4Q61112 Mir6404-201ENSMUST00000183699 94 ntBASIC16.19■□□□□ 0.18
Sdf4Q61112 Gm27357-201ENSMUST00000183754 135 ntBASIC16.19■□□□□ 0.18
Sdf4Q61112 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sdf4Q61112 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Sdf4Q61112 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sdf4Q61112 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdf4Q61112 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdf4Q61112 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdf4Q61112 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdf4Q61112 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Sdf4Q61112 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Sdf4Q61112 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdf4Q61112 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Sdf4Q61112 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Sdf4Q61112 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdf4Q61112 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sdf4Q61112 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdf4Q61112 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sdf4Q61112 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdf4Q61112 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdf4Q61112 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdf4Q61112 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Sdf4Q61112 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdf4Q61112 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sdf4Q61112 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Sdf4Q61112 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdf4Q61112 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Sdf4Q61112 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sdf4Q61112 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sdf4Q61112 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sdf4Q61112 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sdf4Q61112 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.18■□□□□ 0.18
Sdf4Q61112 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sdf4Q61112 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdf4Q61112 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdf4Q61112 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdf4Q61112 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdf4Q61112 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdf4Q61112 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdf4Q61112 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.18■□□□□ 0.18
Sdf4Q61112 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdf4Q61112 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdf4Q61112 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdf4Q61112 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdf4Q61112 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdf4Q61112 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdf4Q61112 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.17■□□□□ 0.18
Sdf4Q61112 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdf4Q61112 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdf4Q61112 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdf4Q61112 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.17■□□□□ 0.18
Sdf4Q61112 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sdf4Q61112 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdf4Q61112 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.17■□□□□ 0.18
Sdf4Q61112 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.17■□□□□ 0.18
Sdf4Q61112 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdf4Q61112 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdf4Q61112 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdf4Q61112 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sdf4Q61112 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms