Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a4Q60857 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a4Q60857 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a4Q60857 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.32■□□□□ 0.2
Slc6a4Q60857 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a4Q60857 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a4Q60857 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a4Q60857 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a4Q60857 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a4Q60857 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Slc6a4Q60857 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a4Q60857 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a4Q60857 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a4Q60857 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a4Q60857 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a4Q60857 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.31■□□□□ 0.2
Slc6a4Q60857 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Slc6a4Q60857 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.3■□□□□ 0.2
Slc6a4Q60857 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a4Q60857 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a4Q60857 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a4Q60857 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a4Q60857 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a4Q60857 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a4Q60857 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a4Q60857 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a4Q60857 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a4Q60857 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a4Q60857 Gm6443-201ENSMUST00000203599 874 ntBASIC16.3■□□□□ 0.2
Slc6a4Q60857 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.3■□□□□ 0.2
Slc6a4Q60857 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a4Q60857 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a4Q60857 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a4Q60857 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a4Q60857 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a4Q60857 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Slc6a4Q60857 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a4Q60857 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a4Q60857 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.3■□□□□ 0.2
Slc6a4Q60857 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Slc6a4Q60857 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a4Q60857 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a4Q60857 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a4Q60857 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a4Q60857 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a4Q60857 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a4Q60857 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a4Q60857 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a4Q60857 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Slc6a4Q60857 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Slc6a4Q60857 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.29■□□□□ 0.2
Slc6a4Q60857 Mir5126-201ENSMUST00000175513 77 ntBASIC16.29■□□□□ 0.2
Slc6a4Q60857 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.29■□□□□ 0.2
Slc6a4Q60857 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a4Q60857 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.29■□□□□ 0.2
Slc6a4Q60857 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a4Q60857 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Slc6a4Q60857 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a4Q60857 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a4Q60857 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Slc6a4Q60857 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Slc6a4Q60857 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Slc6a4Q60857 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a4Q60857 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Slc6a4Q60857 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a4Q60857 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Slc6a4Q60857 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.28■□□□□ 0.2
Slc6a4Q60857 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a4Q60857 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Slc6a4Q60857 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Slc6a4Q60857 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a4Q60857 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.28■□□□□ 0.2
Slc6a4Q60857 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a4Q60857 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a4Q60857 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Slc6a4Q60857 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms