Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm1Q60636 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Prdm1Q60636 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm1Q60636 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm1Q60636 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm1Q60636 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm1Q60636 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm1Q60636 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.65■□□□□ 0.58
Prdm1Q60636 Gm25406-201ENSMUST00000157599 105 ntBASIC18.65■□□□□ 0.58
Prdm1Q60636 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.65■□□□□ 0.58
Prdm1Q60636 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.65■□□□□ 0.58
Prdm1Q60636 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm1Q60636 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.65■□□□□ 0.58
Prdm1Q60636 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.65■□□□□ 0.58
Prdm1Q60636 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm1Q60636 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm1Q60636 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm1Q60636 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm1Q60636 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm1Q60636 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm1Q60636 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm1Q60636 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Prdm1Q60636 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm1Q60636 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm1Q60636 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm1Q60636 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm1Q60636 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.64■□□□□ 0.57
Prdm1Q60636 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.64■□□□□ 0.57
Prdm1Q60636 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm1Q60636 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm1Q60636 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm1Q60636 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Prdm1Q60636 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm1Q60636 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm1Q60636 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.64■□□□□ 0.57
Prdm1Q60636 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm1Q60636 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.63■□□□□ 0.57
Prdm1Q60636 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm1Q60636 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm1Q60636 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm1Q60636 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.63■□□□□ 0.57
Prdm1Q60636 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm1Q60636 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm1Q60636 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm1Q60636 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm1Q60636 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.63■□□□□ 0.57
Prdm1Q60636 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm1Q60636 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Prdm1Q60636 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm1Q60636 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
Prdm1Q60636 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm1Q60636 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.63■□□□□ 0.57
Prdm1Q60636 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm1Q60636 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.63■□□□□ 0.57
Prdm1Q60636 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm1Q60636 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm1Q60636 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm1Q60636 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm1Q60636 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm1Q60636 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm1Q60636 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm1Q60636 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.63■□□□□ 0.57
Prdm1Q60636 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm1Q60636 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm1Q60636 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Prdm1Q60636 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm1Q60636 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm1Q60636 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm1Q60636 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm1Q60636 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm1Q60636 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Prdm1Q60636 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.62■□□□□ 0.57
Prdm1Q60636 Birc2-201ENSMUST00000054878 378 ntBASIC18.62■□□□□ 0.57
Prdm1Q60636 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Prdm1Q60636 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Prdm1Q60636 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm1Q60636 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm1Q60636 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm1Q60636 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm1Q60636 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm1Q60636 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm1Q60636 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.62■□□□□ 0.57
Prdm1Q60636 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm1Q60636 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.62■□□□□ 0.57
Prdm1Q60636 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prdm1Q60636 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Prdm1Q60636 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prdm1Q60636 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prdm1Q60636 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.61■□□□□ 0.57
Prdm1Q60636 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prdm1Q60636 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Prdm1Q60636 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.61■□□□□ 0.57
Prdm1Q60636 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Prdm1Q60636 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prdm1Q60636 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prdm1Q60636 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prdm1Q60636 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prdm1Q60636 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.61■□□□□ 0.57
Prdm1Q60636 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prdm1Q60636 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms