Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.76■□□□□ 0.91
Scaf1Q5U4C3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf1Q5U4C3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf1Q5U4C3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf1Q5U4C3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf1Q5U4C3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf1Q5U4C3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf1Q5U4C3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf1Q5U4C3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Scaf1Q5U4C3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf1Q5U4C3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf1Q5U4C3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Scaf1Q5U4C3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Scaf1Q5U4C3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf1Q5U4C3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC20.75■□□□□ 0.91
Scaf1Q5U4C3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC20.75■□□□□ 0.91
Scaf1Q5U4C3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC20.75■□□□□ 0.91
Scaf1Q5U4C3 Mir1895-201ENSMUST00000122615 79 ntBASIC20.75■□□□□ 0.91
Scaf1Q5U4C3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf1Q5U4C3 Mir7036b-201ENSMUST00000184791 63 ntBASIC20.75■□□□□ 0.91
Scaf1Q5U4C3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf1Q5U4C3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Scaf1Q5U4C3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Scaf1Q5U4C3 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Scaf1Q5U4C3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf1Q5U4C3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Scaf1Q5U4C3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf1Q5U4C3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf1Q5U4C3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf1Q5U4C3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf1Q5U4C3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf1Q5U4C3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf1Q5U4C3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf1Q5U4C3 Gm5648-201ENSMUST00000122244 1587 ntBASIC20.74■□□□□ 0.91
Scaf1Q5U4C3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf1Q5U4C3 Gm7286-201ENSMUST00000182691 1007 ntBASIC20.74■□□□□ 0.91
Scaf1Q5U4C3 Gm2272-201ENSMUST00000194903 582 ntBASIC20.74■□□□□ 0.91
Scaf1Q5U4C3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf1Q5U4C3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf1Q5U4C3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf1Q5U4C3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf1Q5U4C3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf1Q5U4C3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf1Q5U4C3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC20.73■□□□□ 0.91
Scaf1Q5U4C3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf1Q5U4C3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf1Q5U4C3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf1Q5U4C3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf1Q5U4C3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC20.73■□□□□ 0.91
Scaf1Q5U4C3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf1Q5U4C3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC20.73■□□□□ 0.91
Scaf1Q5U4C3 Gm13597-201ENSMUST00000121239 375 ntBASIC20.73■□□□□ 0.91
Scaf1Q5U4C3 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Scaf1Q5U4C3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC20.73■□□□□ 0.91
Scaf1Q5U4C3 Gm17968-201ENSMUST00000194902 784 ntBASIC20.73■□□□□ 0.91
Scaf1Q5U4C3 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC20.73■□□□□ 0.91
Scaf1Q5U4C3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf1Q5U4C3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf1Q5U4C3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf1Q5U4C3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Scaf1Q5U4C3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf1Q5U4C3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.72■□□□□ 0.91
Scaf1Q5U4C3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC20.72■□□□□ 0.91
Scaf1Q5U4C3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf1Q5U4C3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf1Q5U4C3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf1Q5U4C3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC20.72■□□□□ 0.91
Scaf1Q5U4C3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC20.72■□□□□ 0.91
Scaf1Q5U4C3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf1Q5U4C3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf1Q5U4C3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC20.72■□□□□ 0.91
Scaf1Q5U4C3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf1Q5U4C3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf1Q5U4C3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf1Q5U4C3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf1Q5U4C3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf1Q5U4C3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf1Q5U4C3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf1Q5U4C3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC20.71■□□□□ 0.91
Scaf1Q5U4C3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Scaf1Q5U4C3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf1Q5U4C3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf1Q5U4C3 Gm15427-201ENSMUST00000117288 531 ntBASIC20.71■□□□□ 0.91
Scaf1Q5U4C3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC20.71■□□□□ 0.91
Scaf1Q5U4C3 Gm5177-201ENSMUST00000183092 997 ntBASIC20.71■□□□□ 0.91
Scaf1Q5U4C3 Gm27494-201ENSMUST00000184735 189 ntBASIC20.71■□□□□ 0.91
Scaf1Q5U4C3 Gm44492-201ENSMUST00000197012 141 ntBASIC20.71■□□□□ 0.91
Scaf1Q5U4C3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf1Q5U4C3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf1Q5U4C3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf1Q5U4C3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf1Q5U4C3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf1Q5U4C3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf1Q5U4C3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf1Q5U4C3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf1Q5U4C3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf1Q5U4C3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf1Q5U4C3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf1Q5U4C3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf1Q5U4C3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms