Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Mir5130-201ENSMUST00000175160 84 ntBASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Gm7977-201ENSMUST00000193787 748 ntBASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vmn1r223Q5SSA0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vmn1r223Q5SSA0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Vmn1r223Q5SSA0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vmn1r223Q5SSA0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vmn1r223Q5SSA0 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.99□□□□□ -0.17
Vmn1r223Q5SSA0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vmn1r223Q5SSA0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vmn1r223Q5SSA0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vmn1r223Q5SSA0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vmn1r223Q5SSA0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vmn1r223Q5SSA0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.99□□□□□ -0.17
Vmn1r223Q5SSA0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.99□□□□□ -0.17
Vmn1r223Q5SSA0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.99□□□□□ -0.17
Vmn1r223Q5SSA0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vmn1r223Q5SSA0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.99□□□□□ -0.17
Vmn1r223Q5SSA0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.99□□□□□ -0.17
Vmn1r223Q5SSA0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.99□□□□□ -0.17
Vmn1r223Q5SSA0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Vmn1r223Q5SSA0 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.99□□□□□ -0.17
Vmn1r223Q5SSA0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vmn1r223Q5SSA0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vmn1r223Q5SSA0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vmn1r223Q5SSA0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vmn1r223Q5SSA0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Sybu-209ENSMUST00000228639 4113 ntBASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmn1r223Q5SSA0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vmn1r223Q5SSA0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vmn1r223Q5SSA0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vmn1r223Q5SSA0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vmn1r223Q5SSA0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.97□□□□□ -0.17
Vmn1r223Q5SSA0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Vmn1r223Q5SSA0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vmn1r223Q5SSA0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vmn1r223Q5SSA0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.97□□□□□ -0.17
Vmn1r223Q5SSA0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Vmn1r223Q5SSA0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.97□□□□□ -0.17
Vmn1r223Q5SSA0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.97□□□□□ -0.17
Vmn1r223Q5SSA0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vmn1r223Q5SSA0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vmn1r223Q5SSA0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.97□□□□□ -0.17
Vmn1r223Q5SSA0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms