Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Gm21814-202ENSMUST00000203277 873 ntBASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Asic1-205ENSMUST00000228185 1818 ntBASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Gm27463-201ENSMUST00000183569 57 ntBASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8d-1Q5R1H8 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Gm37025-201ENSMUST00000195159 829 ntBASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8d-1Q5R1H8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Gm12085-201ENSMUST00000119263 940 ntBASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Gm24841-201ENSMUST00000158676 357 ntBASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Gm38027-201ENSMUST00000192315 235 ntBASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Gm3375-201ENSMUST00000203929 796 ntBASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Gm30025-201ENSMUST00000218555 728 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms