Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.22■□□□□ 0.19
Rnf43Q5NCP0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf43Q5NCP0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.22■□□□□ 0.19
Rnf43Q5NCP0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf43Q5NCP0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rnf43Q5NCP0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf43Q5NCP0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf43Q5NCP0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Rnf43Q5NCP0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf43Q5NCP0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf43Q5NCP0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf43Q5NCP0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf43Q5NCP0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf43Q5NCP0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf43Q5NCP0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf43Q5NCP0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rnf43Q5NCP0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf43Q5NCP0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.21■□□□□ 0.19
Rnf43Q5NCP0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.21■□□□□ 0.19
Rnf43Q5NCP0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.21■□□□□ 0.19
Rnf43Q5NCP0 Gm5682-201ENSMUST00000173402 505 ntBASIC16.21■□□□□ 0.19
Rnf43Q5NCP0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf43Q5NCP0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf43Q5NCP0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf43Q5NCP0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf43Q5NCP0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf43Q5NCP0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.21■□□□□ 0.19
Rnf43Q5NCP0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf43Q5NCP0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf43Q5NCP0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Rnf43Q5NCP0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rnf43Q5NCP0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rnf43Q5NCP0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf43Q5NCP0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf43Q5NCP0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf43Q5NCP0 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.18■□□□□ 0.18
Rnf43Q5NCP0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
Rnf43Q5NCP0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf43Q5NCP0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf43Q5NCP0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf43Q5NCP0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Rnf43Q5NCP0 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.18■□□□□ 0.18
Rnf43Q5NCP0 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.18■□□□□ 0.18
Rnf43Q5NCP0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf43Q5NCP0 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.18■□□□□ 0.18
Rnf43Q5NCP0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf43Q5NCP0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.18■□□□□ 0.18
Rnf43Q5NCP0 Auts2-212ENSMUST00000178555 309 ntBASIC16.18■□□□□ 0.18
Rnf43Q5NCP0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.18■□□□□ 0.18
Rnf43Q5NCP0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms