Protein–RNA interactions for Protein: Q5F4S9

Trpm3, Transient receptor potential cation channel, subfamily M, member 3, mousemouse

Predictions only

Length 1,721 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm3Q5F4S9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trpm3Q5F4S9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC20.1■□□□□ 0.81
Trpm3Q5F4S9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trpm3Q5F4S9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trpm3Q5F4S9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC20.1■□□□□ 0.81
Trpm3Q5F4S9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trpm3Q5F4S9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Trpm3Q5F4S9 Gm15920-201ENSMUST00000118998 402 ntBASIC20.1■□□□□ 0.81
Trpm3Q5F4S9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Trpm3Q5F4S9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trpm3Q5F4S9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trpm3Q5F4S9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trpm3Q5F4S9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Trpm3Q5F4S9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trpm3Q5F4S9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trpm3Q5F4S9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm3Q5F4S9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm3Q5F4S9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Trpm3Q5F4S9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm3Q5F4S9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm3Q5F4S9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm3Q5F4S9 Gm8318-201ENSMUST00000182954 872 ntBASIC20.09■□□□□ 0.81
Trpm3Q5F4S9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC20.09■□□□□ 0.81
Trpm3Q5F4S9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC20.09■□□□□ 0.81
Trpm3Q5F4S9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm3Q5F4S9 Gm18246-201ENSMUST00000221023 728 ntBASIC20.09■□□□□ 0.81
Trpm3Q5F4S9 AC158982.1-201ENSMUST00000228377 901 ntBASIC20.09■□□□□ 0.81
Trpm3Q5F4S9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm3Q5F4S9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm3Q5F4S9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm3Q5F4S9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm3Q5F4S9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm3Q5F4S9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm3Q5F4S9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Trpm3Q5F4S9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm3Q5F4S9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm3Q5F4S9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm3Q5F4S9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm3Q5F4S9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm3Q5F4S9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trpm3Q5F4S9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trpm3Q5F4S9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trpm3Q5F4S9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC20.08■□□□□ 0.81
Trpm3Q5F4S9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trpm3Q5F4S9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trpm3Q5F4S9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trpm3Q5F4S9 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trpm3Q5F4S9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Trpm3Q5F4S9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trpm3Q5F4S9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trpm3Q5F4S9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trpm3Q5F4S9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.08■□□□□ 0.8
Trpm3Q5F4S9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trpm3Q5F4S9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trpm3Q5F4S9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trpm3Q5F4S9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trpm3Q5F4S9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trpm3Q5F4S9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trpm3Q5F4S9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trpm3Q5F4S9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC20.07■□□□□ 0.8
Trpm3Q5F4S9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Trpm3Q5F4S9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trpm3Q5F4S9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trpm3Q5F4S9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trpm3Q5F4S9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trpm3Q5F4S9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC20.07■□□□□ 0.8
Trpm3Q5F4S9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trpm3Q5F4S9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trpm3Q5F4S9 Gm37166-201ENSMUST00000195473 2474 ntBASIC20.07■□□□□ 0.8
Trpm3Q5F4S9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trpm3Q5F4S9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trpm3Q5F4S9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trpm3Q5F4S9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trpm3Q5F4S9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Trpm3Q5F4S9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trpm3Q5F4S9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC20.06■□□□□ 0.8
Trpm3Q5F4S9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trpm3Q5F4S9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC20.06■□□□□ 0.8
Trpm3Q5F4S9 AC151836.1-202ENSMUST00000226259 753 ntBASIC20.06■□□□□ 0.8
Trpm3Q5F4S9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trpm3Q5F4S9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Trpm3Q5F4S9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC20.06■□□□□ 0.8
Trpm3Q5F4S9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trpm3Q5F4S9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trpm3Q5F4S9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Trpm3Q5F4S9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trpm3Q5F4S9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Trpm3Q5F4S9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trpm3Q5F4S9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trpm3Q5F4S9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC20.06■□□□□ 0.8
Trpm3Q5F4S9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trpm3Q5F4S9 Gm13337-201ENSMUST00000119183 1594 ntBASIC20.06■□□□□ 0.8
Trpm3Q5F4S9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trpm3Q5F4S9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trpm3Q5F4S9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trpm3Q5F4S9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trpm3Q5F4S9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trpm3Q5F4S9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Trpm3Q5F4S9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trpm3Q5F4S9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms