Protein–RNA interactions for Protein: Q3V038

Ttc9, Tetratricopeptide repeat protein 9A, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc9Q3V038 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ttc9Q3V038 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ttc9Q3V038 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc9Q3V038 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc9Q3V038 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc9Q3V038 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.02■□□□□ 0.32
Ttc9Q3V038 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.02■□□□□ 0.32
Ttc9Q3V038 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc9Q3V038 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc9Q3V038 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc9Q3V038 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc9Q3V038 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc9Q3V038 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.02■□□□□ 0.32
Ttc9Q3V038 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc9Q3V038 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.02■□□□□ 0.32
Ttc9Q3V038 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc9Q3V038 Gm14494-201ENSMUST00000118786 435 ntBASIC17.02■□□□□ 0.32
Ttc9Q3V038 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc9Q3V038 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Ttc9Q3V038 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.02■□□□□ 0.32
Ttc9Q3V038 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.02■□□□□ 0.32
Ttc9Q3V038 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc9Q3V038 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc9Q3V038 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc9Q3V038 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ttc9Q3V038 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc9Q3V038 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Ttc9Q3V038 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ttc9Q3V038 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ttc9Q3V038 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ttc9Q3V038 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ttc9Q3V038 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc9Q3V038 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc9Q3V038 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc9Q3V038 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc9Q3V038 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ttc9Q3V038 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc9Q3V038 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc9Q3V038 Gm14822-201ENSMUST00000122247 291 ntBASIC17.01■□□□□ 0.31
Ttc9Q3V038 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.01■□□□□ 0.31
Ttc9Q3V038 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.01■□□□□ 0.31
Ttc9Q3V038 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc9Q3V038 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc9Q3V038 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.01■□□□□ 0.31
Ttc9Q3V038 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc9Q3V038 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc9Q3V038 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc9Q3V038 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc9Q3V038 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc9Q3V038 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc9Q3V038 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc9Q3V038 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc9Q3V038 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc9Q3V038 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc9Q3V038 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc9Q3V038 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ttc9Q3V038 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ttc9Q3V038 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Ttc9Q3V038 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc9Q3V038 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17■□□□□ 0.31
Ttc9Q3V038 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ttc9Q3V038 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ttc9Q3V038 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ttc9Q3V038 Gm6858-201ENSMUST00000208582 1468 ntBASIC17■□□□□ 0.31
Ttc9Q3V038 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc9Q3V038 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc9Q3V038 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc9Q3V038 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ttc9Q3V038 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ttc9Q3V038 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc9Q3V038 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc9Q3V038 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Ttc9Q3V038 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ttc9Q3V038 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ttc9Q3V038 Gm13312-201ENSMUST00000119631 718 ntBASIC17■□□□□ 0.31
Ttc9Q3V038 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17■□□□□ 0.31
Ttc9Q3V038 Gm12260-201ENSMUST00000122447 411 ntBASIC17■□□□□ 0.31
Ttc9Q3V038 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17■□□□□ 0.31
Ttc9Q3V038 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc9Q3V038 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc9Q3V038 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17■□□□□ 0.31
Ttc9Q3V038 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17■□□□□ 0.31
Ttc9Q3V038 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ttc9Q3V038 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17■□□□□ 0.31
Ttc9Q3V038 CT009713.7-201ENSMUST00000224689 571 ntBASIC17■□□□□ 0.31
Ttc9Q3V038 AC114585.2-202ENSMUST00000228094 426 ntBASIC17■□□□□ 0.31
Ttc9Q3V038 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc9Q3V038 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc9Q3V038 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc9Q3V038 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ttc9Q3V038 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ttc9Q3V038 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ttc9Q3V038 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ttc9Q3V038 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Ttc9Q3V038 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ttc9Q3V038 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ttc9Q3V038 Gm4995-201ENSMUST00000117247 432 ntBASIC16.99■□□□□ 0.31
Ttc9Q3V038 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ttc9Q3V038 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ttc9Q3V038 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms