Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hspg2Q05793 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hspg2Q05793 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Hspg2Q05793 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hspg2Q05793 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Hspg2Q05793 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Hspg2Q05793 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hspg2Q05793 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hspg2Q05793 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.68□□□□□ -0.54
Hspg2Q05793 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hspg2Q05793 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.68□□□□□ -0.54
Hspg2Q05793 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Hspg2Q05793 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.68□□□□□ -0.54
Hspg2Q05793 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.68□□□□□ -0.54
Hspg2Q05793 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hspg2Q05793 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hspg2Q05793 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hspg2Q05793 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hspg2Q05793 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hspg2Q05793 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hspg2Q05793 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Hspg2Q05793 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
Hspg2Q05793 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hspg2Q05793 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hspg2Q05793 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.68□□□□□ -0.54
Hspg2Q05793 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.68□□□□□ -0.54
Hspg2Q05793 Gm18187-201ENSMUST00000196476 984 ntBASIC11.68□□□□□ -0.54
Hspg2Q05793 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hspg2Q05793 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.68□□□□□ -0.54
Hspg2Q05793 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.68□□□□□ -0.54
Hspg2Q05793 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hspg2Q05793 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hspg2Q05793 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hspg2Q05793 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Hspg2Q05793 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hspg2Q05793 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hspg2Q05793 Gm17271-201ENSMUST00000165535 355 ntBASIC11.68□□□□□ -0.54
Hspg2Q05793 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.68□□□□□ -0.54
Hspg2Q05793 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.68□□□□□ -0.54
Hspg2Q05793 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hspg2Q05793 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC11.67□□□□□ -0.54
Hspg2Q05793 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hspg2Q05793 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm11841-201ENSMUST00000117060 1963 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hspg2Q05793 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Mir449b-201ENSMUST00000104833 80 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm11745-201ENSMUST00000121669 448 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.67□□□□□ -0.54
Hspg2Q05793 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm45167-201ENSMUST00000208007 322 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.67□□□□□ -0.54
Hspg2Q05793 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Hspg2Q05793 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hspg2Q05793 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hspg2Q05793 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hspg2Q05793 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hspg2Q05793 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hspg2Q05793 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Hspg2Q05793 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hspg2Q05793 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Hspg2Q05793 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hspg2Q05793 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hspg2Q05793 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Hspg2Q05793 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hspg2Q05793 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hspg2Q05793 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC11.67□□□□□ -0.54
Hspg2Q05793 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Hspg2Q05793 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm22065-201ENSMUST00000103753 110 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm22066-201ENSMUST00000103761 110 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm24932-201ENSMUST00000103763 110 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm24115-201ENSMUST00000103799 110 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm22190-201ENSMUST00000103827 110 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm22191-201ENSMUST00000103831 110 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm24721-201ENSMUST00000103849 110 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm28018-201ENSMUST00000103869 110 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm26399-201ENSMUST00000103937 110 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.67□□□□□ -0.54
Hspg2Q05793 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm25349-201ENSMUST00000177728 110 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm23616-201ENSMUST00000177797 110 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm25871-201ENSMUST00000177816 110 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm24752-201ENSMUST00000178240 110 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm24496-201ENSMUST00000178287 110 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm25649-201ENSMUST00000178476 110 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm25548-201ENSMUST00000178681 110 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm23147-201ENSMUST00000178841 110 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm26095-201ENSMUST00000179270 110 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm22171-201ENSMUST00000179283 110 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm23936-201ENSMUST00000179354 110 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm22619-201ENSMUST00000179516 110 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm25255-201ENSMUST00000179579 110 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm24755-201ENSMUST00000179691 110 ntBASIC11.67□□□□□ -0.54
Hspg2Q05793 Gm26506-201ENSMUST00000179692 110 ntBASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms