Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PrkdcP97313 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PrkdcP97313 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC10.85□□□□□ -0.67
PrkdcP97313 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC10.85□□□□□ -0.67
PrkdcP97313 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
PrkdcP97313 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC10.84□□□□□ -0.67
PrkdcP97313 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PrkdcP97313 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PrkdcP97313 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
PrkdcP97313 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PrkdcP97313 Gm9908-201ENSMUST00000211534 448 ntBASIC10.84□□□□□ -0.67
PrkdcP97313 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
PrkdcP97313 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
PrkdcP97313 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC10.84□□□□□ -0.67
PrkdcP97313 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PrkdcP97313 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
PrkdcP97313 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
PrkdcP97313 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC10.84□□□□□ -0.67
PrkdcP97313 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PrkdcP97313 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC10.84□□□□□ -0.67
PrkdcP97313 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PrkdcP97313 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PrkdcP97313 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
PrkdcP97313 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC10.84□□□□□ -0.67
PrkdcP97313 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.84□□□□□ -0.67
PrkdcP97313 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
PrkdcP97313 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PrkdcP97313 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PrkdcP97313 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
PrkdcP97313 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PrkdcP97313 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
PrkdcP97313 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
PrkdcP97313 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
PrkdcP97313 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PrkdcP97313 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC10.83□□□□□ -0.68
PrkdcP97313 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PrkdcP97313 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PrkdcP97313 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PrkdcP97313 Gm11478-201ENSMUST00000117851 599 ntBASIC10.83□□□□□ -0.68
PrkdcP97313 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PrkdcP97313 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
PrkdcP97313 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
PrkdcP97313 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC10.83□□□□□ -0.68
PrkdcP97313 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
PrkdcP97313 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PrkdcP97313 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
PrkdcP97313 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PrkdcP97313 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
PrkdcP97313 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PrkdcP97313 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PrkdcP97313 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
PrkdcP97313 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC10.83□□□□□ -0.68
PrkdcP97313 Gm45384-201ENSMUST00000210451 277 ntBASIC10.83□□□□□ -0.68
PrkdcP97313 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PrkdcP97313 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PrkdcP97313 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
PrkdcP97313 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.82□□□□□ -0.68
PrkdcP97313 Gm27533-201ENSMUST00000183800 152 ntBASIC10.82□□□□□ -0.68
PrkdcP97313 Gm42612-201ENSMUST00000197986 623 ntBASIC10.82□□□□□ -0.68
PrkdcP97313 Gm43170-201ENSMUST00000199827 612 ntBASIC10.82□□□□□ -0.68
PrkdcP97313 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PrkdcP97313 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
PrkdcP97313 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
PrkdcP97313 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC10.82□□□□□ -0.68
PrkdcP97313 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PrkdcP97313 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
PrkdcP97313 AC025913.2-201ENSMUST00000220136 1766 ntBASIC10.82□□□□□ -0.68
PrkdcP97313 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
PrkdcP97313 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PrkdcP97313 Gm18827-201ENSMUST00000188341 790 ntBASIC10.82□□□□□ -0.68
PrkdcP97313 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC10.82□□□□□ -0.68
PrkdcP97313 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PrkdcP97313 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PrkdcP97313 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PrkdcP97313 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.82□□□□□ -0.68
PrkdcP97313 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
PrkdcP97313 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PrkdcP97313 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PrkdcP97313 Wnt10b-206ENSMUST00000228546 2709 ntBASIC10.82□□□□□ -0.68
PrkdcP97313 Gm13410-201ENSMUST00000117058 1415 ntBASIC10.82□□□□□ -0.68
PrkdcP97313 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
PrkdcP97313 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PrkdcP97313 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC10.82□□□□□ -0.68
PrkdcP97313 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC10.82□□□□□ -0.68
PrkdcP97313 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PrkdcP97313 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PrkdcP97313 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PrkdcP97313 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
PrkdcP97313 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
PrkdcP97313 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
PrkdcP97313 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
PrkdcP97313 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
PrkdcP97313 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PrkdcP97313 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PrkdcP97313 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PrkdcP97313 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
PrkdcP97313 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
PrkdcP97313 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
PrkdcP97313 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
PrkdcP97313 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms