Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcbP82349 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SgcbP82349 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcbP82349 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcbP82349 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SgcbP82349 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcbP82349 Gm7153-201ENSMUST00000117092 455 ntBASIC14.23□□□□□ -0.13
SgcbP82349 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.23□□□□□ -0.13
SgcbP82349 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SgcbP82349 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.23□□□□□ -0.13
SgcbP82349 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.23□□□□□ -0.13
SgcbP82349 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SgcbP82349 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcbP82349 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.23□□□□□ -0.13
SgcbP82349 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcbP82349 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcbP82349 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SgcbP82349 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcbP82349 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcbP82349 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SgcbP82349 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcbP82349 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SgcbP82349 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SgcbP82349 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcbP82349 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcbP82349 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcbP82349 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
SgcbP82349 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SgcbP82349 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SgcbP82349 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcbP82349 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcbP82349 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcbP82349 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
SgcbP82349 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SgcbP82349 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcbP82349 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SgcbP82349 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.22□□□□□ -0.13
SgcbP82349 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.22□□□□□ -0.13
SgcbP82349 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.22□□□□□ -0.13
SgcbP82349 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.22□□□□□ -0.13
SgcbP82349 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
SgcbP82349 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcbP82349 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SgcbP82349 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcbP82349 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcbP82349 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.22□□□□□ -0.13
SgcbP82349 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcbP82349 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcbP82349 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SgcbP82349 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcbP82349 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcbP82349 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.22□□□□□ -0.13
SgcbP82349 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcbP82349 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcbP82349 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcbP82349 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SgcbP82349 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SgcbP82349 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SgcbP82349 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SgcbP82349 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SgcbP82349 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SgcbP82349 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
SgcbP82349 Gm24589-201ENSMUST00000116692 94 ntBASIC14.21□□□□□ -0.13
SgcbP82349 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SgcbP82349 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.21□□□□□ -0.13
SgcbP82349 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.21□□□□□ -0.13
SgcbP82349 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SgcbP82349 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SgcbP82349 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.21□□□□□ -0.13
SgcbP82349 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SgcbP82349 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SgcbP82349 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SgcbP82349 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SgcbP82349 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
SgcbP82349 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SgcbP82349 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
SgcbP82349 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SgcbP82349 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SgcbP82349 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SgcbP82349 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
SgcbP82349 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SgcbP82349 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
SgcbP82349 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SgcbP82349 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SgcbP82349 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SgcbP82349 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcbP82349 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcbP82349 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcbP82349 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcbP82349 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcbP82349 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcbP82349 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.2□□□□□ -0.14
SgcbP82349 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcbP82349 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcbP82349 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcbP82349 Gm43347-201ENSMUST00000200226 580 ntBASIC14.2□□□□□ -0.14
SgcbP82349 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.2□□□□□ -0.14
SgcbP82349 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.2□□□□□ -0.14
SgcbP82349 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcbP82349 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms