Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrch1P62046 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrch1P62046 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrch1P62046 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrch1P62046 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Lrch1P62046 Mir449b-201ENSMUST00000104833 80 ntBASIC18.76■□□□□ 0.59
Lrch1P62046 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrch1P62046 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrch1P62046 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.76■□□□□ 0.59
Lrch1P62046 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lrch1P62046 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.76■□□□□ 0.59
Lrch1P62046 Gm43125-201ENSMUST00000201724 730 ntBASIC18.76■□□□□ 0.59
Lrch1P62046 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC18.76■□□□□ 0.59
Lrch1P62046 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrch1P62046 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrch1P62046 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrch1P62046 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrch1P62046 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Lrch1P62046 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrch1P62046 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrch1P62046 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrch1P62046 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrch1P62046 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Lrch1P62046 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lrch1P62046 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrch1P62046 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrch1P62046 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrch1P62046 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrch1P62046 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrch1P62046 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrch1P62046 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lrch1P62046 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Lrch1P62046 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Lrch1P62046 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.75■□□□□ 0.59
Lrch1P62046 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lrch1P62046 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC18.75■□□□□ 0.59
Lrch1P62046 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrch1P62046 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC18.75■□□□□ 0.59
Lrch1P62046 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lrch1P62046 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
Lrch1P62046 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.75■□□□□ 0.59
Lrch1P62046 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrch1P62046 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrch1P62046 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrch1P62046 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.75■□□□□ 0.59
Lrch1P62046 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lrch1P62046 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrch1P62046 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrch1P62046 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrch1P62046 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lrch1P62046 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrch1P62046 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Lrch1P62046 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrch1P62046 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lrch1P62046 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Lrch1P62046 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrch1P62046 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrch1P62046 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC18.74■□□□□ 0.59
Lrch1P62046 Gm12428-201ENSMUST00000119844 727 ntBASIC18.74■□□□□ 0.59
Lrch1P62046 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lrch1P62046 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC18.74■□□□□ 0.59
Lrch1P62046 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrch1P62046 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC18.74■□□□□ 0.59
Lrch1P62046 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC18.74■□□□□ 0.59
Lrch1P62046 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrch1P62046 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Lrch1P62046 Thap2-203ENSMUST00000218989 527 ntBASIC18.74■□□□□ 0.59
Lrch1P62046 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lrch1P62046 AC126408.1-201ENSMUST00000225184 523 ntBASIC18.74■□□□□ 0.59
Lrch1P62046 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC18.74■□□□□ 0.59
Lrch1P62046 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrch1P62046 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrch1P62046 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrch1P62046 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrch1P62046 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrch1P62046 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrch1P62046 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrch1P62046 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lrch1P62046 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrch1P62046 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrch1P62046 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Lrch1P62046 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC18.73■□□□□ 0.59
Lrch1P62046 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC18.73■□□□□ 0.59
Lrch1P62046 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.73■□□□□ 0.59
Lrch1P62046 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Lrch1P62046 Gm27622-201ENSMUST00000183779 60 ntBASIC18.73■□□□□ 0.59
Lrch1P62046 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC18.73■□□□□ 0.59
Lrch1P62046 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrch1P62046 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrch1P62046 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lrch1P62046 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrch1P62046 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrch1P62046 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrch1P62046 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Lrch1P62046 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.72■□□□□ 0.59
Lrch1P62046 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrch1P62046 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lrch1P62046 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
Lrch1P62046 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrch1P62046 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms