Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a1P61620 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.1□□□□□ -0.15
Sec61a1P61620 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.1□□□□□ -0.15
Sec61a1P61620 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.1□□□□□ -0.15
Sec61a1P61620 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sec61a1P61620 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a1P61620 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a1P61620 Asic1-205ENSMUST00000228185 1818 ntBASIC14.1□□□□□ -0.15
Sec61a1P61620 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a1P61620 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a1P61620 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sec61a1P61620 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.09□□□□□ -0.15
Sec61a1P61620 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Sec61a1P61620 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Sec61a1P61620 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sec61a1P61620 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Gm23634-201ENSMUST00000175071 91 ntBASIC14.09□□□□□ -0.15
Sec61a1P61620 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.09□□□□□ -0.15
Sec61a1P61620 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Sec61a1P61620 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a1P61620 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sec61a1P61620 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sec61a1P61620 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Sec61a1P61620 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sec61a1P61620 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a1P61620 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a1P61620 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a1P61620 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a1P61620 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.08□□□□□ -0.16
Sec61a1P61620 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Sec61a1P61620 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Sec61a1P61620 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Sec61a1P61620 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a1P61620 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
Sec61a1P61620 Gm13474-201ENSMUST00000122466 815 ntBASIC14.08□□□□□ -0.16
Sec61a1P61620 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a1P61620 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.08□□□□□ -0.16
Sec61a1P61620 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a1P61620 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a1P61620 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a1P61620 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Sec61a1P61620 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a1P61620 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a1P61620 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Sec61a1P61620 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.08□□□□□ -0.16
Sec61a1P61620 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Sec61a1P61620 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a1P61620 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a1P61620 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a1P61620 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a1P61620 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a1P61620 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a1P61620 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a1P61620 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a1P61620 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Sec61a1P61620 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sec61a1P61620 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a1P61620 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a1P61620 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sec61a1P61620 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a1P61620 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sec61a1P61620 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a1P61620 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.07□□□□□ -0.16
Sec61a1P61620 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a1P61620 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a1P61620 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sec61a1P61620 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a1P61620 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sec61a1P61620 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.07□□□□□ -0.16
Sec61a1P61620 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sec61a1P61620 Gm7213-201ENSMUST00000215977 950 ntBASIC14.07□□□□□ -0.16
Sec61a1P61620 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a1P61620 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a1P61620 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.07□□□□□ -0.16
Sec61a1P61620 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a1P61620 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms