Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b6P59708 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b6P59708 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.19□□□□□ -0.14
Sf3b6P59708 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Sf3b6P59708 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sf3b6P59708 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.19□□□□□ -0.14
Sf3b6P59708 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sf3b6P59708 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Sf3b6P59708 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sf3b6P59708 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.19□□□□□ -0.14
Sf3b6P59708 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Sf3b6P59708 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.19□□□□□ -0.14
Sf3b6P59708 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.19□□□□□ -0.14
Sf3b6P59708 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.19□□□□□ -0.14
Sf3b6P59708 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.19□□□□□ -0.14
Sf3b6P59708 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sf3b6P59708 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.19□□□□□ -0.14
Sf3b6P59708 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b6P59708 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b6P59708 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b6P59708 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b6P59708 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.18□□□□□ -0.14
Sf3b6P59708 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b6P59708 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b6P59708 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sf3b6P59708 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b6P59708 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b6P59708 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b6P59708 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sf3b6P59708 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b6P59708 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.18□□□□□ -0.14
Sf3b6P59708 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sf3b6P59708 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.18□□□□□ -0.14
Sf3b6P59708 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.18□□□□□ -0.14
Sf3b6P59708 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sf3b6P59708 Gm18421-201ENSMUST00000204122 625 ntBASIC14.18□□□□□ -0.14
Sf3b6P59708 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b6P59708 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b6P59708 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sf3b6P59708 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b6P59708 Gm5417-201ENSMUST00000079706 384 ntBASIC14.18□□□□□ -0.14
Sf3b6P59708 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sf3b6P59708 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sf3b6P59708 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b6P59708 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b6P59708 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b6P59708 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b6P59708 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b6P59708 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sf3b6P59708 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b6P59708 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b6P59708 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sf3b6P59708 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sf3b6P59708 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b6P59708 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sf3b6P59708 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.17□□□□□ -0.14
Sf3b6P59708 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Sf3b6P59708 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.17□□□□□ -0.14
Sf3b6P59708 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.17□□□□□ -0.14
Sf3b6P59708 Gm44487-201ENSMUST00000205145 325 ntBASIC14.17□□□□□ -0.14
Sf3b6P59708 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.17□□□□□ -0.14
Sf3b6P59708 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms