Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdkn2bP55271 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdkn2bP55271 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdkn2bP55271 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Cdkn2bP55271 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Gm13559-201ENSMUST00000120476 863 ntBASIC15.32■□□□□ 0.04
Cdkn2bP55271 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkn2bP55271 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Gm27011-201ENSMUST00000182352 972 ntBASIC15.32■□□□□ 0.04
Cdkn2bP55271 Gm37055-201ENSMUST00000191866 133 ntBASIC15.32■□□□□ 0.04
Cdkn2bP55271 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.32■□□□□ 0.04
Cdkn2bP55271 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkn2bP55271 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdkn2bP55271 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkn2bP55271 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.31■□□□□ 0.04
Cdkn2bP55271 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkn2bP55271 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkn2bP55271 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.31■□□□□ 0.04
Cdkn2bP55271 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkn2bP55271 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkn2bP55271 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkn2bP55271 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkn2bP55271 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Cdkn2bP55271 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkn2bP55271 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.31■□□□□ 0.04
Cdkn2bP55271 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.31■□□□□ 0.04
Cdkn2bP55271 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.31■□□□□ 0.04
Cdkn2bP55271 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkn2bP55271 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.31■□□□□ 0.04
Cdkn2bP55271 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkn2bP55271 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cdkn2bP55271 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.31■□□□□ 0.04
Cdkn2bP55271 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkn2bP55271 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cdkn2bP55271 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkn2bP55271 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkn2bP55271 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkn2bP55271 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkn2bP55271 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdkn2bP55271 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.3■□□□□ 0.04
Cdkn2bP55271 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkn2bP55271 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkn2bP55271 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.3■□□□□ 0.04
Cdkn2bP55271 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkn2bP55271 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.3■□□□□ 0.04
Cdkn2bP55271 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
Cdkn2bP55271 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cdkn2bP55271 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkn2bP55271 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkn2bP55271 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdkn2bP55271 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cdkn2bP55271 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
Cdkn2bP55271 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkn2bP55271 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkn2bP55271 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkn2bP55271 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkn2bP55271 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkn2bP55271 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkn2bP55271 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn2bP55271 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cdkn2bP55271 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn2bP55271 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn2bP55271 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Cdkn2bP55271 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn2bP55271 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn2bP55271 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn2bP55271 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn2bP55271 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.29■□□□□ 0.04
Cdkn2bP55271 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn2bP55271 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn2bP55271 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms