Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nek1P51954 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Nek1P51954 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nek1P51954 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nek1P51954 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nek1P51954 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nek1P51954 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nek1P51954 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nek1P51954 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nek1P51954 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nek1P51954 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nek1P51954 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nek1P51954 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nek1P51954 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nek1P51954 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nek1P51954 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Nek1P51954 Gm7153-201ENSMUST00000117092 455 ntBASIC17.82■□□□□ 0.44
Nek1P51954 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nek1P51954 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nek1P51954 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nek1P51954 Gm18669-201ENSMUST00000216049 778 ntBASIC17.82■□□□□ 0.44
Nek1P51954 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.82■□□□□ 0.44
Nek1P51954 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nek1P51954 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nek1P51954 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nek1P51954 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Nek1P51954 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nek1P51954 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nek1P51954 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Nek1P51954 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nek1P51954 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nek1P51954 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Nek1P51954 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Nek1P51954 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.81■□□□□ 0.44
Nek1P51954 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Nek1P51954 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Nek1P51954 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nek1P51954 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nek1P51954 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nek1P51954 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nek1P51954 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nek1P51954 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nek1P51954 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.81■□□□□ 0.44
Nek1P51954 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.81■□□□□ 0.44
Nek1P51954 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nek1P51954 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nek1P51954 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nek1P51954 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Nek1P51954 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek1P51954 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek1P51954 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek1P51954 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek1P51954 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Nek1P51954 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek1P51954 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek1P51954 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek1P51954 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek1P51954 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek1P51954 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek1P51954 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Nek1P51954 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek1P51954 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek1P51954 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek1P51954 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek1P51954 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Nek1P51954 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.8■□□□□ 0.44
Nek1P51954 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek1P51954 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek1P51954 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek1P51954 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
Nek1P51954 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Nek1P51954 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek1P51954 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nek1P51954 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nek1P51954 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Nek1P51954 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nek1P51954 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nek1P51954 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.79■□□□□ 0.44
Nek1P51954 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nek1P51954 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nek1P51954 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Nek1P51954 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nek1P51954 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nek1P51954 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nek1P51954 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.79■□□□□ 0.44
Nek1P51954 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nek1P51954 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nek1P51954 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nek1P51954 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nek1P51954 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nek1P51954 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nek1P51954 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nek1P51954 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nek1P51954 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nek1P51954 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nek1P51954 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nek1P51954 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Nek1P51954 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nek1P51954 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nek1P51954 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms