Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LtbrP50284 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
LtbrP50284 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LtbrP50284 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LtbrP50284 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LtbrP50284 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.7■□□□□ 0.58
LtbrP50284 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LtbrP50284 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LtbrP50284 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.69■□□□□ 0.58
LtbrP50284 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LtbrP50284 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.69■□□□□ 0.58
LtbrP50284 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.69■□□□□ 0.58
LtbrP50284 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LtbrP50284 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LtbrP50284 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LtbrP50284 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LtbrP50284 Gm17271-201ENSMUST00000165535 355 ntBASIC18.69■□□□□ 0.58
LtbrP50284 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.69■□□□□ 0.58
LtbrP50284 Gm5745-201ENSMUST00000183748 313 ntBASIC18.69■□□□□ 0.58
LtbrP50284 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LtbrP50284 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.69■□□□□ 0.58
LtbrP50284 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.69■□□□□ 0.58
LtbrP50284 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LtbrP50284 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LtbrP50284 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LtbrP50284 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LtbrP50284 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LtbrP50284 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LtbrP50284 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LtbrP50284 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LtbrP50284 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.68■□□□□ 0.58
LtbrP50284 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LtbrP50284 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LtbrP50284 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LtbrP50284 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LtbrP50284 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
LtbrP50284 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LtbrP50284 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LtbrP50284 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LtbrP50284 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LtbrP50284 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LtbrP50284 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LtbrP50284 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LtbrP50284 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LtbrP50284 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
LtbrP50284 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LtbrP50284 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LtbrP50284 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.68■□□□□ 0.58
LtbrP50284 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.68■□□□□ 0.58
LtbrP50284 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.68■□□□□ 0.58
LtbrP50284 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LtbrP50284 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LtbrP50284 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LtbrP50284 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LtbrP50284 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LtbrP50284 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LtbrP50284 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
LtbrP50284 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LtbrP50284 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LtbrP50284 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.68■□□□□ 0.58
LtbrP50284 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LtbrP50284 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LtbrP50284 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LtbrP50284 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LtbrP50284 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LtbrP50284 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LtbrP50284 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LtbrP50284 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LtbrP50284 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
LtbrP50284 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LtbrP50284 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LtbrP50284 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
LtbrP50284 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LtbrP50284 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.67■□□□□ 0.58
LtbrP50284 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LtbrP50284 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LtbrP50284 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LtbrP50284 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LtbrP50284 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LtbrP50284 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LtbrP50284 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LtbrP50284 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LtbrP50284 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LtbrP50284 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LtbrP50284 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.66■□□□□ 0.58
LtbrP50284 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.66■□□□□ 0.58
LtbrP50284 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LtbrP50284 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LtbrP50284 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LtbrP50284 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.66■□□□□ 0.58
LtbrP50284 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.66■□□□□ 0.58
LtbrP50284 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LtbrP50284 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LtbrP50284 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LtbrP50284 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LtbrP50284 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LtbrP50284 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LtbrP50284 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LtbrP50284 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
LtbrP50284 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms