Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.93■□□□□ 0.3
HttP42859 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.93■□□□□ 0.3
HttP42859 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.93■□□□□ 0.3
HttP42859 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HttP42859 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HttP42859 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
HttP42859 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HttP42859 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HttP42859 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.93■□□□□ 0.3
HttP42859 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.93■□□□□ 0.3
HttP42859 Gm8602-201ENSMUST00000184045 607 ntBASIC16.93■□□□□ 0.3
HttP42859 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HttP42859 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HttP42859 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HttP42859 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HttP42859 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HttP42859 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HttP42859 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
HttP42859 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HttP42859 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HttP42859 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HttP42859 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HttP42859 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HttP42859 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HttP42859 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HttP42859 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HttP42859 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HttP42859 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.92■□□□□ 0.3
HttP42859 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HttP42859 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HttP42859 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HttP42859 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HttP42859 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.92■□□□□ 0.3
HttP42859 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HttP42859 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HttP42859 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HttP42859 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HttP42859 Syt7-204ENSMUST00000223586 1344 ntBASIC16.92■□□□□ 0.3
HttP42859 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.92■□□□□ 0.3
HttP42859 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HttP42859 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HttP42859 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HttP42859 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HttP42859 Gm6415-201ENSMUST00000118488 348 ntBASIC16.92■□□□□ 0.3
HttP42859 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.92■□□□□ 0.3
HttP42859 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HttP42859 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HttP42859 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HttP42859 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HttP42859 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HttP42859 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.91■□□□□ 0.3
HttP42859 Gm18246-201ENSMUST00000221023 728 ntBASIC16.91■□□□□ 0.3
HttP42859 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HttP42859 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HttP42859 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
HttP42859 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HttP42859 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HttP42859 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HttP42859 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HttP42859 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HttP42859 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HttP42859 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HttP42859 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HttP42859 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HttP42859 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HttP42859 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HttP42859 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HttP42859 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.9■□□□□ 0.3
HttP42859 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HttP42859 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.9■□□□□ 0.3
HttP42859 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HttP42859 Gm13015-201ENSMUST00000118674 204 ntBASIC16.9■□□□□ 0.3
HttP42859 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.9■□□□□ 0.3
HttP42859 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HttP42859 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HttP42859 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HttP42859 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HttP42859 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HttP42859 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HttP42859 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HttP42859 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HttP42859 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.9■□□□□ 0.3
HttP42859 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HttP42859 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.89■□□□□ 0.3
HttP42859 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.3
HttP42859 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.89■□□□□ 0.29
HttP42859 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HttP42859 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HttP42859 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HttP42859 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HttP42859 Gm28630-201ENSMUST00000187806 498 ntBASIC16.89■□□□□ 0.29
HttP42859 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.89■□□□□ 0.29
HttP42859 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.89■□□□□ 0.29
HttP42859 Gm7775-201ENSMUST00000218871 853 ntBASIC16.89■□□□□ 0.29
HttP42859 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.89■□□□□ 0.29
HttP42859 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HttP42859 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HttP42859 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HttP42859 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.89■□□□□ 0.29
HttP42859 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms