Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LdlrP35951 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
LdlrP35951 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.91■□□□□ 0.14
LdlrP35951 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.91■□□□□ 0.14
LdlrP35951 Gm28033-201ENSMUST00000184224 96 ntBASIC15.91■□□□□ 0.14
LdlrP35951 Gm21559-201ENSMUST00000220638 855 ntBASIC15.91■□□□□ 0.14
LdlrP35951 Gm8587-201ENSMUST00000076538 843 ntBASIC15.91■□□□□ 0.14
LdlrP35951 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LdlrP35951 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LdlrP35951 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.91■□□□□ 0.14
LdlrP35951 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.91■□□□□ 0.14
LdlrP35951 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
LdlrP35951 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
LdlrP35951 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
LdlrP35951 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LdlrP35951 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LdlrP35951 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LdlrP35951 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LdlrP35951 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LdlrP35951 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LdlrP35951 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LdlrP35951 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LdlrP35951 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LdlrP35951 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LdlrP35951 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LdlrP35951 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LdlrP35951 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LdlrP35951 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LdlrP35951 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LdlrP35951 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
LdlrP35951 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
LdlrP35951 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LdlrP35951 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LdlrP35951 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.9■□□□□ 0.14
LdlrP35951 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LdlrP35951 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LdlrP35951 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LdlrP35951 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
LdlrP35951 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LdlrP35951 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LdlrP35951 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
LdlrP35951 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LdlrP35951 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LdlrP35951 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LdlrP35951 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LdlrP35951 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LdlrP35951 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LdlrP35951 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LdlrP35951 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LdlrP35951 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LdlrP35951 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LdlrP35951 Gm9013-201ENSMUST00000132939 882 ntBASIC15.89■□□□□ 0.13
LdlrP35951 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.89■□□□□ 0.13
LdlrP35951 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LdlrP35951 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LdlrP35951 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LdlrP35951 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LdlrP35951 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LdlrP35951 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LdlrP35951 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LdlrP35951 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LdlrP35951 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LdlrP35951 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LdlrP35951 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LdlrP35951 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LdlrP35951 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LdlrP35951 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LdlrP35951 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LdlrP35951 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LdlrP35951 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LdlrP35951 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LdlrP35951 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LdlrP35951 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LdlrP35951 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LdlrP35951 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LdlrP35951 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LdlrP35951 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LdlrP35951 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LdlrP35951 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.88■□□□□ 0.13
LdlrP35951 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.88■□□□□ 0.13
LdlrP35951 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LdlrP35951 Gm27389-201ENSMUST00000183622 195 ntBASIC15.88■□□□□ 0.13
LdlrP35951 Mir1668-201ENSMUST00000184114 107 ntBASIC15.88■□□□□ 0.13
LdlrP35951 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LdlrP35951 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
LdlrP35951 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
LdlrP35951 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LdlrP35951 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.88■□□□□ 0.13
LdlrP35951 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LdlrP35951 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LdlrP35951 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LdlrP35951 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
LdlrP35951 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.87■□□□□ 0.13
LdlrP35951 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
LdlrP35951 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LdlrP35951 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LdlrP35951 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LdlrP35951 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LdlrP35951 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LdlrP35951 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms