Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a11P31650 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a11P31650 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a11P31650 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a11P31650 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a11P31650 App-207ENSMUST00000227737 2827 ntBASIC15.17■□□□□ 0.02
Slc6a11P31650 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a11P31650 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a11P31650 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a11P31650 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a11P31650 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
Slc6a11P31650 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.17■□□□□ 0.02
Slc6a11P31650 Gm17808-201ENSMUST00000200859 894 ntBASIC15.17■□□□□ 0.02
Slc6a11P31650 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.17■□□□□ 0.02
Slc6a11P31650 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.17■□□□□ 0.02
Slc6a11P31650 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.17■□□□□ 0.02
Slc6a11P31650 Gm18115-201ENSMUST00000221209 621 ntBASIC15.17■□□□□ 0.02
Slc6a11P31650 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a11P31650 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a11P31650 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a11P31650 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a11P31650 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a11P31650 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a11P31650 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a11P31650 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Slc6a11P31650 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a11P31650 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a11P31650 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a11P31650 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.16■□□□□ 0.02
Slc6a11P31650 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.16■□□□□ 0.02
Slc6a11P31650 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.16■□□□□ 0.02
Slc6a11P31650 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.16■□□□□ 0.02
Slc6a11P31650 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Slc6a11P31650 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Slc6a11P31650 Gm44450-201ENSMUST00000199528 114 ntBASIC15.16■□□□□ 0.02
Slc6a11P31650 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Slc6a11P31650 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a11P31650 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a11P31650 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a11P31650 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a11P31650 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.15■□□□□ 0.02
Slc6a11P31650 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a11P31650 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a11P31650 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a11P31650 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a11P31650 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a11P31650 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Slc6a11P31650 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a11P31650 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a11P31650 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a11P31650 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a11P31650 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a11P31650 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.15■□□□□ 0.02
Slc6a11P31650 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.15■□□□□ 0.02
Slc6a11P31650 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a11P31650 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a11P31650 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a11P31650 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a11P31650 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a11P31650 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.02
Slc6a11P31650 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a11P31650 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.14■□□□□ 0.01
Slc6a11P31650 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a11P31650 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a11P31650 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a11P31650 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a11P31650 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a11P31650 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a11P31650 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a11P31650 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a11P31650 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a11P31650 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a11P31650 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
Slc6a11P31650 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.14■□□□□ 0.01
Slc6a11P31650 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a11P31650 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms