Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Prim1P20664 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC20.25■□□□□ 0.83
Prim1P20664 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC20.25■□□□□ 0.83
Prim1P20664 AC122901.1-201ENSMUST00000214203 1790 ntBASIC20.25■□□□□ 0.83
Prim1P20664 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prim1P20664 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prim1P20664 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prim1P20664 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.25■□□□□ 0.83
Prim1P20664 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prim1P20664 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prim1P20664 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prim1P20664 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prim1P20664 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Prim1P20664 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prim1P20664 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prim1P20664 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prim1P20664 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prim1P20664 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prim1P20664 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC20.24■□□□□ 0.83
Prim1P20664 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.24■□□□□ 0.83
Prim1P20664 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC20.24■□□□□ 0.83
Prim1P20664 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC20.24■□□□□ 0.83
Prim1P20664 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prim1P20664 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prim1P20664 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Prim1P20664 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prim1P20664 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prim1P20664 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prim1P20664 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prim1P20664 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prim1P20664 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prim1P20664 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC20.24■□□□□ 0.83
Prim1P20664 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.24■□□□□ 0.83
Prim1P20664 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prim1P20664 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC20.23■□□□□ 0.83
Prim1P20664 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Prim1P20664 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prim1P20664 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prim1P20664 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prim1P20664 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prim1P20664 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC20.23■□□□□ 0.83
Prim1P20664 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prim1P20664 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
Prim1P20664 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC20.23■□□□□ 0.83
Prim1P20664 Gm6257-201ENSMUST00000163864 910 ntBASIC20.23■□□□□ 0.83
Prim1P20664 AC093926.2-201ENSMUST00000214468 1228 ntBASIC20.23■□□□□ 0.83
Prim1P20664 AC132104.2-201ENSMUST00000215011 266 ntBASIC20.23■□□□□ 0.83
Prim1P20664 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prim1P20664 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prim1P20664 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC20.23■□□□□ 0.83
Prim1P20664 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Prim1P20664 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC20.23■□□□□ 0.83
Prim1P20664 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prim1P20664 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prim1P20664 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prim1P20664 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prim1P20664 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prim1P20664 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Prim1P20664 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.22■□□□□ 0.83
Prim1P20664 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prim1P20664 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Prim1P20664 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prim1P20664 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prim1P20664 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.22■□□□□ 0.83
Prim1P20664 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Prim1P20664 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Prim1P20664 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC20.22■□□□□ 0.83
Prim1P20664 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prim1P20664 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prim1P20664 Gm2308-201ENSMUST00000166539 1004 ntBASIC20.22■□□□□ 0.83
Prim1P20664 Gm43935-201ENSMUST00000203569 1050 ntBASIC20.22■□□□□ 0.83
Prim1P20664 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC20.22■□□□□ 0.83
Prim1P20664 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.22■□□□□ 0.83
Prim1P20664 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prim1P20664 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prim1P20664 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prim1P20664 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prim1P20664 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prim1P20664 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prim1P20664 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prim1P20664 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prim1P20664 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prim1P20664 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prim1P20664 Gm11594-201ENSMUST00000122313 162 ntBASIC20.21■□□□□ 0.83
Prim1P20664 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prim1P20664 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prim1P20664 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC20.21■□□□□ 0.83
Prim1P20664 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC20.21■□□□□ 0.83
Prim1P20664 AC147366.1-201ENSMUST00000227671 852 ntBASIC20.21■□□□□ 0.83
Prim1P20664 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prim1P20664 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prim1P20664 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Prim1P20664 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Prim1P20664 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prim1P20664 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC20.21■□□□□ 0.83
Prim1P20664 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Prim1P20664 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prim1P20664 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prim1P20664 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prim1P20664 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms