Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VimP20152 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.31■□□□□ 0.2
VimP20152 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VimP20152 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VimP20152 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
VimP20152 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VimP20152 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VimP20152 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VimP20152 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VimP20152 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
VimP20152 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VimP20152 Gm7290-201ENSMUST00000104990 617 ntBASIC16.31■□□□□ 0.2
VimP20152 Gm12918-201ENSMUST00000120234 636 ntBASIC16.31■□□□□ 0.2
VimP20152 Gm15710-201ENSMUST00000121821 636 ntBASIC16.31■□□□□ 0.2
VimP20152 Gm24841-201ENSMUST00000158676 357 ntBASIC16.31■□□□□ 0.2
VimP20152 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.31■□□□□ 0.2
VimP20152 Gm5075-201ENSMUST00000196916 622 ntBASIC16.31■□□□□ 0.2
VimP20152 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.31■□□□□ 0.2
VimP20152 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.31■□□□□ 0.2
VimP20152 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VimP20152 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VimP20152 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.31■□□□□ 0.2
VimP20152 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.31■□□□□ 0.2
VimP20152 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VimP20152 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VimP20152 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
VimP20152 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VimP20152 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
VimP20152 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.31■□□□□ 0.2
VimP20152 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.31■□□□□ 0.2
VimP20152 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VimP20152 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
VimP20152 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
VimP20152 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VimP20152 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VimP20152 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VimP20152 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VimP20152 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VimP20152 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.3■□□□□ 0.2
VimP20152 Gm10033-202ENSMUST00000211874 928 ntBASIC16.3■□□□□ 0.2
VimP20152 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VimP20152 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VimP20152 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VimP20152 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.3■□□□□ 0.2
VimP20152 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
VimP20152 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VimP20152 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
VimP20152 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
VimP20152 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
VimP20152 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VimP20152 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
VimP20152 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VimP20152 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.29■□□□□ 0.2
VimP20152 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
VimP20152 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VimP20152 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VimP20152 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VimP20152 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VimP20152 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.29■□□□□ 0.2
VimP20152 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VimP20152 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
VimP20152 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
VimP20152 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VimP20152 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
VimP20152 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
VimP20152 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VimP20152 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VimP20152 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
VimP20152 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
VimP20152 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
VimP20152 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VimP20152 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VimP20152 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
VimP20152 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VimP20152 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VimP20152 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VimP20152 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VimP20152 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VimP20152 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VimP20152 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VimP20152 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VimP20152 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
VimP20152 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.28■□□□□ 0.2
VimP20152 Gm18671-201ENSMUST00000214826 683 ntBASIC16.28■□□□□ 0.2
VimP20152 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
VimP20152 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
VimP20152 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VimP20152 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VimP20152 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VimP20152 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.28■□□□□ 0.2
VimP20152 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VimP20152 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VimP20152 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VimP20152 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VimP20152 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.28■□□□□ 0.2
VimP20152 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VimP20152 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VimP20152 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VimP20152 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
VimP20152 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms