Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp6P0C0A3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.4■□□□□ 0.38
Chmp6P0C0A3 Ank2-226ENSMUST00000189368 339 ntBASIC17.4■□□□□ 0.38
Chmp6P0C0A3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp6P0C0A3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp6P0C0A3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp6P0C0A3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp6P0C0A3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp6P0C0A3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Chmp6P0C0A3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp6P0C0A3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp6P0C0A3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp6P0C0A3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Chmp6P0C0A3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.39■□□□□ 0.38
Chmp6P0C0A3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Chmp6P0C0A3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Chmp6P0C0A3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp6P0C0A3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp6P0C0A3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp6P0C0A3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp6P0C0A3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp6P0C0A3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp6P0C0A3 Gm17807-201ENSMUST00000186869 298 ntBASIC17.39■□□□□ 0.37
Chmp6P0C0A3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.39■□□□□ 0.37
Chmp6P0C0A3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp6P0C0A3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp6P0C0A3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp6P0C0A3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp6P0C0A3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp6P0C0A3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp6P0C0A3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp6P0C0A3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp6P0C0A3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp6P0C0A3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Mir3081-201ENSMUST00000175305 84 ntBASIC17.38■□□□□ 0.37
Chmp6P0C0A3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Gm44430-201ENSMUST00000203376 995 ntBASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp6P0C0A3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp6P0C0A3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp6P0C0A3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.37■□□□□ 0.37
Chmp6P0C0A3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Chmp6P0C0A3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.37■□□□□ 0.37
Chmp6P0C0A3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.37■□□□□ 0.37
Chmp6P0C0A3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp6P0C0A3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp6P0C0A3 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp6P0C0A3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp6P0C0A3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp6P0C0A3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp6P0C0A3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp6P0C0A3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp6P0C0A3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp6P0C0A3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp6P0C0A3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp6P0C0A3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp6P0C0A3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp6P0C0A3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp6P0C0A3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp6P0C0A3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp6P0C0A3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp6P0C0A3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp6P0C0A3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp6P0C0A3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Chmp6P0C0A3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp6P0C0A3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Chmp6P0C0A3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp6P0C0A3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp6P0C0A3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.36■□□□□ 0.37
Chmp6P0C0A3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Chmp6P0C0A3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.36■□□□□ 0.37
Chmp6P0C0A3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.36■□□□□ 0.37
Chmp6P0C0A3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp6P0C0A3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.36■□□□□ 0.37
Chmp6P0C0A3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms