Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.92■□□□□ 0.3
TnfP06804 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TnfP06804 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.92■□□□□ 0.3
TnfP06804 AV026068-213ENSMUST00000223675 1171 ntBASIC16.92■□□□□ 0.3
TnfP06804 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TnfP06804 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.92■□□□□ 0.3
TnfP06804 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TnfP06804 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.91■□□□□ 0.3
TnfP06804 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TnfP06804 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TnfP06804 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TnfP06804 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TnfP06804 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TnfP06804 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TnfP06804 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TnfP06804 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TnfP06804 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TnfP06804 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.91■□□□□ 0.3
TnfP06804 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.91■□□□□ 0.3
TnfP06804 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TnfP06804 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.91■□□□□ 0.3
TnfP06804 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.91■□□□□ 0.3
TnfP06804 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.91■□□□□ 0.3
TnfP06804 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TnfP06804 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TnfP06804 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TnfP06804 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TnfP06804 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TnfP06804 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TnfP06804 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TnfP06804 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
TnfP06804 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TnfP06804 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
TnfP06804 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TnfP06804 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TnfP06804 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TnfP06804 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TnfP06804 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TnfP06804 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TnfP06804 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TnfP06804 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TnfP06804 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TnfP06804 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.9■□□□□ 0.3
TnfP06804 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TnfP06804 Gm27525-201ENSMUST00000184465 107 ntBASIC16.9■□□□□ 0.3
TnfP06804 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.9■□□□□ 0.3
TnfP06804 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TnfP06804 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TnfP06804 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.9■□□□□ 0.3
TnfP06804 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.9■□□□□ 0.3
TnfP06804 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TnfP06804 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TnfP06804 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TnfP06804 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TnfP06804 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TnfP06804 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TnfP06804 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TnfP06804 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TnfP06804 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TnfP06804 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TnfP06804 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TnfP06804 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TnfP06804 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TnfP06804 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.89■□□□□ 0.29
TnfP06804 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.89■□□□□ 0.29
TnfP06804 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.89■□□□□ 0.29
TnfP06804 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TnfP06804 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TnfP06804 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TnfP06804 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TnfP06804 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TnfP06804 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TnfP06804 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TnfP06804 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TnfP06804 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TnfP06804 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TnfP06804 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TnfP06804 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TnfP06804 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TnfP06804 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TnfP06804 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.88■□□□□ 0.29
TnfP06804 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TnfP06804 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.88■□□□□ 0.29
TnfP06804 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TnfP06804 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TnfP06804 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TnfP06804 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TnfP06804 Gm7222-201ENSMUST00000117512 906 ntBASIC16.88■□□□□ 0.29
TnfP06804 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.88■□□□□ 0.29
TnfP06804 Gm6257-201ENSMUST00000163864 910 ntBASIC16.88■□□□□ 0.29
TnfP06804 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.88■□□□□ 0.29
TnfP06804 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.88■□□□□ 0.29
TnfP06804 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TnfP06804 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TnfP06804 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TnfP06804 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TnfP06804 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TnfP06804 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TnfP06804 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TnfP06804 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms