Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.15■□□□□ 0.18
PdgfrbP05622 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.15■□□□□ 0.18
PdgfrbP05622 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PdgfrbP05622 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PdgfrbP05622 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PdgfrbP05622 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PdgfrbP05622 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PdgfrbP05622 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PdgfrbP05622 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PdgfrbP05622 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PdgfrbP05622 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PdgfrbP05622 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PdgfrbP05622 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PdgfrbP05622 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PdgfrbP05622 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PdgfrbP05622 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.15■□□□□ 0.18
PdgfrbP05622 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PdgfrbP05622 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
PdgfrbP05622 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PdgfrbP05622 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PdgfrbP05622 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PdgfrbP05622 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PdgfrbP05622 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PdgfrbP05622 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PdgfrbP05622 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PdgfrbP05622 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PdgfrbP05622 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PdgfrbP05622 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PdgfrbP05622 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PdgfrbP05622 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.14■□□□□ 0.17
PdgfrbP05622 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PdgfrbP05622 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PdgfrbP05622 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PdgfrbP05622 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PdgfrbP05622 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PdgfrbP05622 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PdgfrbP05622 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PdgfrbP05622 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PdgfrbP05622 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PdgfrbP05622 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PdgfrbP05622 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PdgfrbP05622 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PdgfrbP05622 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PdgfrbP05622 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.13■□□□□ 0.17
PdgfrbP05622 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PdgfrbP05622 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.13■□□□□ 0.17
PdgfrbP05622 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.13■□□□□ 0.17
PdgfrbP05622 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PdgfrbP05622 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.13■□□□□ 0.17
PdgfrbP05622 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.13■□□□□ 0.17
PdgfrbP05622 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PdgfrbP05622 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.13■□□□□ 0.17
PdgfrbP05622 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PdgfrbP05622 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PdgfrbP05622 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
PdgfrbP05622 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PdgfrbP05622 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.13■□□□□ 0.17
PdgfrbP05622 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PdgfrbP05622 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PdgfrbP05622 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.13■□□□□ 0.17
PdgfrbP05622 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.13■□□□□ 0.17
PdgfrbP05622 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PdgfrbP05622 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.13■□□□□ 0.17
PdgfrbP05622 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PdgfrbP05622 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PdgfrbP05622 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PdgfrbP05622 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PdgfrbP05622 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PdgfrbP05622 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PdgfrbP05622 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PdgfrbP05622 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PdgfrbP05622 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PdgfrbP05622 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PdgfrbP05622 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PdgfrbP05622 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PdgfrbP05622 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PdgfrbP05622 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PdgfrbP05622 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.12■□□□□ 0.17
PdgfrbP05622 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PdgfrbP05622 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.12■□□□□ 0.17
PdgfrbP05622 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PdgfrbP05622 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PdgfrbP05622 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.12■□□□□ 0.17
PdgfrbP05622 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PdgfrbP05622 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PdgfrbP05622 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PdgfrbP05622 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PdgfrbP05622 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
PdgfrbP05622 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.12■□□□□ 0.17
PdgfrbP05622 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PdgfrbP05622 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PdgfrbP05622 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PdgfrbP05622 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PdgfrbP05622 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PdgfrbP05622 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.11■□□□□ 0.17
PdgfrbP05622 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PdgfrbP05622 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PdgfrbP05622 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PdgfrbP05622 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PdgfrbP05622 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms