Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Igh-VJ558P01758 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Igh-VJ558P01758 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Igh-VJ558P01758 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Igh-VJ558P01758 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Igh-VJ558P01758 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Gm6257-201ENSMUST00000163864 910 ntBASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Gm27742-201ENSMUST00000184667 60 ntBASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Igh-VJ558P01758 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.81□□□□□ -0.2
Igh-VJ558P01758 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Igh-VJ558P01758 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igh-VJ558P01758 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igh-VJ558P01758 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Igh-VJ558P01758 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Igh-VJ558P01758 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igh-VJ558P01758 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.8□□□□□ -0.2
Igh-VJ558P01758 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.8□□□□□ -0.2
Igh-VJ558P01758 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Igh-VJ558P01758 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igh-VJ558P01758 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Igh-VJ558P01758 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igh-VJ558P01758 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igh-VJ558P01758 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Igh-VJ558P01758 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.8□□□□□ -0.2
Igh-VJ558P01758 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.8□□□□□ -0.2
Igh-VJ558P01758 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igh-VJ558P01758 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igh-VJ558P01758 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Igh-VJ558P01758 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igh-VJ558P01758 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Igh-VJ558P01758 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Igh-VJ558P01758 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igh-VJ558P01758 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igh-VJ558P01758 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igh-VJ558P01758 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igh-VJ558P01758 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.79□□□□□ -0.2
Igh-VJ558P01758 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.78□□□□□ -0.2
Igh-VJ558P01758 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Igh-VJ558P01758 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Igh-VJ558P01758 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Igh-VJ558P01758 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Igh-VJ558P01758 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Igh-VJ558P01758 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Igh-VJ558P01758 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Igh-VJ558P01758 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms