Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ifna1P01572 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ifna1P01572 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ifna1P01572 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ifna1P01572 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ifna1P01572 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Ifna1P01572 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ifna1P01572 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ifna1P01572 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ifna1P01572 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ifna1P01572 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ifna1P01572 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ifna1P01572 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ifna1P01572 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ifna1P01572 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ifna1P01572 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ifna1P01572 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ifna1P01572 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ifna1P01572 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ifna1P01572 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.49□□□□□ -0.25
Ifna1P01572 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ifna1P01572 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ifna1P01572 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ifna1P01572 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Ifna1P01572 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ifna1P01572 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.49□□□□□ -0.25
Ifna1P01572 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.49□□□□□ -0.25
Ifna1P01572 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.49□□□□□ -0.25
Ifna1P01572 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.49□□□□□ -0.25
Ifna1P01572 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.49□□□□□ -0.25
Ifna1P01572 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ifna1P01572 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ifna1P01572 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ifna1P01572 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ifna1P01572 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ifna1P01572 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ifna1P01572 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ifna1P01572 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ifna1P01572 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ifna1P01572 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Ifna1P01572 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ifna1P01572 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ifna1P01572 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ifna1P01572 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ifna1P01572 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ifna1P01572 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ifna1P01572 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ifna1P01572 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Ifna1P01572 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ifna1P01572 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ifna1P01572 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ifna1P01572 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ifna1P01572 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ifna1P01572 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.48□□□□□ -0.25
Ifna1P01572 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ifna1P01572 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ifna1P01572 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ifna1P01572 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ifna1P01572 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ifna1P01572 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ifna1P01572 Gm36967-201ENSMUST00000193814 266 ntBASIC13.48□□□□□ -0.25
Ifna1P01572 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ifna1P01572 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ifna1P01572 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ifna1P01572 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ifna1P01572 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ifna1P01572 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ifna1P01572 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ifna1P01572 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ifna1P01572 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.48□□□□□ -0.25
Ifna1P01572 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ifna1P01572 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ifna1P01572 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ifna1P01572 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ifna1P01572 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ifna1P01572 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ifna1P01572 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ifna1P01572 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.47□□□□□ -0.25
Ifna1P01572 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.47□□□□□ -0.25
Ifna1P01572 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Ifna1P01572 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ifna1P01572 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.47□□□□□ -0.25
Ifna1P01572 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.47□□□□□ -0.25
Ifna1P01572 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.47□□□□□ -0.25
Ifna1P01572 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.47□□□□□ -0.25
Ifna1P01572 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ifna1P01572 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
Ifna1P01572 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.47□□□□□ -0.25
Ifna1P01572 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms