Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Matn4O89029 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.1■□□□□ 0.01
Matn4O89029 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Matn4O89029 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Matn4O89029 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Matn4O89029 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Matn4O89029 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Matn4O89029 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Matn4O89029 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Matn4O89029 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Matn4O89029 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Matn4O89029 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Matn4O89029 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Matn4O89029 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Matn4O89029 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Matn4O89029 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.1■□□□□ 0.01
Matn4O89029 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Matn4O89029 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Matn4O89029 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Matn4O89029 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Matn4O89029 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Matn4O89029 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Matn4O89029 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Matn4O89029 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Matn4O89029 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Matn4O89029 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Matn4O89029 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Matn4O89029 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Matn4O89029 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Matn4O89029 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Matn4O89029 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Matn4O89029 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Matn4O89029 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Matn4O89029 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.09■□□□□ 0.01
Matn4O89029 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
Matn4O89029 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Matn4O89029 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Matn4O89029 BC037039-201ENSMUST00000192003 2205 ntBASIC15.09■□□□□ 0.01
Matn4O89029 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.09■□□□□ 0.01
Matn4O89029 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Matn4O89029 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Matn4O89029 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Matn4O89029 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Matn4O89029 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Matn4O89029 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.08■□□□□ 0.01
Matn4O89029 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Matn4O89029 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Matn4O89029 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Matn4O89029 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Matn4O89029 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.08■□□□□ 0
Matn4O89029 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Matn4O89029 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Matn4O89029 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Matn4O89029 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Matn4O89029 Gm22240-201ENSMUST00000175225 82 ntBASIC15.08■□□□□ 0
Matn4O89029 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.08■□□□□ 0
Matn4O89029 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Matn4O89029 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Matn4O89029 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.08■□□□□ 0
Matn4O89029 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
Matn4O89029 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.08■□□□□ 0
Matn4O89029 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Matn4O89029 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Matn4O89029 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.08■□□□□ 0
Matn4O89029 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.08■□□□□ 0
Matn4O89029 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Matn4O89029 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Matn4O89029 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.08■□□□□ 0
Matn4O89029 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.07■□□□□ 0
Matn4O89029 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Matn4O89029 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Matn4O89029 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Matn4O89029 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Matn4O89029 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.07■□□□□ 0
Matn4O89029 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Matn4O89029 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.07■□□□□ 0
Matn4O89029 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Matn4O89029 Gm27011-201ENSMUST00000182352 972 ntBASIC15.07■□□□□ 0
Matn4O89029 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.07■□□□□ 0
Matn4O89029 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.07■□□□□ 0
Matn4O89029 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.07■□□□□ 0
Matn4O89029 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Matn4O89029 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.07■□□□□ 0
Matn4O89029 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.07■□□□□ 0
Matn4O89029 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.07■□□□□ 0
Matn4O89029 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Matn4O89029 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.06■□□□□ 0
Matn4O89029 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Matn4O89029 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.06■□□□□ 0
Matn4O89029 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Matn4O89029 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.06■□□□□ 0
Matn4O89029 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.06■□□□□ 0
Matn4O89029 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Matn4O89029 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.06■□□□□ 0
Matn4O89029 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.06■□□□□ 0
Matn4O89029 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Matn4O89029 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.06■□□□□ 0
Matn4O89029 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Matn4O89029 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.06■□□□□ 0
Matn4O89029 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms