Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ShdO88834 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ShdO88834 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ShdO88834 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ShdO88834 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.32■□□□□ 0.2
ShdO88834 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.32■□□□□ 0.2
ShdO88834 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ShdO88834 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ShdO88834 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ShdO88834 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ShdO88834 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ShdO88834 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ShdO88834 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ShdO88834 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ShdO88834 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ShdO88834 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ShdO88834 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShdO88834 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShdO88834 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShdO88834 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShdO88834 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.31■□□□□ 0.2
ShdO88834 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShdO88834 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ShdO88834 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.31■□□□□ 0.2
ShdO88834 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.31■□□□□ 0.2
ShdO88834 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShdO88834 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ShdO88834 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShdO88834 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ShdO88834 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShdO88834 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ShdO88834 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShdO88834 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShdO88834 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShdO88834 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShdO88834 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShdO88834 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ShdO88834 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShdO88834 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShdO88834 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ShdO88834 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShdO88834 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ShdO88834 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShdO88834 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ShdO88834 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShdO88834 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ShdO88834 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.3■□□□□ 0.2
ShdO88834 Gm13312-201ENSMUST00000119631 718 ntBASIC16.3■□□□□ 0.2
ShdO88834 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShdO88834 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.3■□□□□ 0.2
ShdO88834 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.3■□□□□ 0.2
ShdO88834 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.3■□□□□ 0.2
ShdO88834 Prob1-201ENSMUST00000097619 3021 ntBASIC16.3■□□□□ 0.2
ShdO88834 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShdO88834 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShdO88834 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
ShdO88834 App-207ENSMUST00000227737 2827 ntBASIC16.3■□□□□ 0.2
ShdO88834 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShdO88834 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShdO88834 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShdO88834 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShdO88834 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShdO88834 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.29■□□□□ 0.2
ShdO88834 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShdO88834 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShdO88834 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShdO88834 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ShdO88834 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShdO88834 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShdO88834 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ShdO88834 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.29■□□□□ 0.2
ShdO88834 Mir3081-201ENSMUST00000175305 84 ntBASIC16.29■□□□□ 0.2
ShdO88834 Mir6404-201ENSMUST00000183699 94 ntBASIC16.29■□□□□ 0.2
ShdO88834 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ShdO88834 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ShdO88834 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShdO88834 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ShdO88834 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.29■□□□□ 0.2
ShdO88834 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShdO88834 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShdO88834 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ShdO88834 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShdO88834 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ShdO88834 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.29■□□□□ 0.2
ShdO88834 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShdO88834 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShdO88834 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ShdO88834 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ShdO88834 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShdO88834 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ShdO88834 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ShdO88834 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShdO88834 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShdO88834 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.28■□□□□ 0.2
ShdO88834 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ShdO88834 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.28■□□□□ 0.2
ShdO88834 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShdO88834 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShdO88834 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShdO88834 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms