Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.43■□□□□ 0.22
Sdc4O35988 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdc4O35988 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sdc4O35988 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc4O35988 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc4O35988 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Sdc4O35988 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Sdc4O35988 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc4O35988 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc4O35988 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc4O35988 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc4O35988 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Sdc4O35988 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.42■□□□□ 0.22
Sdc4O35988 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc4O35988 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc4O35988 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Sdc4O35988 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.42■□□□□ 0.22
Sdc4O35988 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc4O35988 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Sdc4O35988 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Sdc4O35988 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc4O35988 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc4O35988 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc4O35988 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Sdc4O35988 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc4O35988 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc4O35988 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.42■□□□□ 0.22
Sdc4O35988 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc4O35988 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc4O35988 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc4O35988 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc4O35988 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc4O35988 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc4O35988 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc4O35988 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc4O35988 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.41■□□□□ 0.22
Sdc4O35988 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Sdc4O35988 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.41■□□□□ 0.22
Sdc4O35988 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Sdc4O35988 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Sdc4O35988 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Sdc4O35988 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc4O35988 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc4O35988 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc4O35988 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc4O35988 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc4O35988 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc4O35988 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc4O35988 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc4O35988 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc4O35988 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc4O35988 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc4O35988 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc4O35988 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc4O35988 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sdc4O35988 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc4O35988 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc4O35988 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc4O35988 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc4O35988 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.4■□□□□ 0.22
Sdc4O35988 Gm15173-201ENSMUST00000122049 433 ntBASIC16.4■□□□□ 0.22
Sdc4O35988 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc4O35988 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc4O35988 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc4O35988 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc4O35988 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc4O35988 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sdc4O35988 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc4O35988 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc4O35988 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc4O35988 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc4O35988 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc4O35988 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.4■□□□□ 0.22
Sdc4O35988 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc4O35988 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc4O35988 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Sdc4O35988 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Sdc4O35988 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.39■□□□□ 0.22
Sdc4O35988 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc4O35988 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc4O35988 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc4O35988 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc4O35988 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Sdc4O35988 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc4O35988 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.39■□□□□ 0.21
Sdc4O35988 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.39■□□□□ 0.21
Sdc4O35988 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.39■□□□□ 0.21
Sdc4O35988 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.39■□□□□ 0.21
Sdc4O35988 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.39■□□□□ 0.21
Sdc4O35988 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.39■□□□□ 0.21
Sdc4O35988 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc4O35988 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.39■□□□□ 0.21
Sdc4O35988 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.39■□□□□ 0.21
Sdc4O35988 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Sdc4O35988 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.39■□□□□ 0.21
Sdc4O35988 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.39■□□□□ 0.21
Sdc4O35988 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.39■□□□□ 0.21
Sdc4O35988 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.39■□□□□ 0.21
Sdc4O35988 Gm8825-201ENSMUST00000182565 998 ntBASIC16.39■□□□□ 0.21
Sdc4O35988 Gm4518-201ENSMUST00000182638 718 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms