Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a4O35874 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Slc1a4O35874 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Slc1a4O35874 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Slc1a4O35874 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Slc1a4O35874 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.73■□□□□ 0.59
Slc1a4O35874 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a4O35874 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a4O35874 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a4O35874 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a4O35874 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a4O35874 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a4O35874 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a4O35874 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a4O35874 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a4O35874 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Slc1a4O35874 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Slc1a4O35874 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.73■□□□□ 0.59
Slc1a4O35874 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Slc1a4O35874 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a4O35874 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a4O35874 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a4O35874 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a4O35874 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a4O35874 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a4O35874 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a4O35874 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.72■□□□□ 0.59
Slc1a4O35874 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Slc1a4O35874 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.72■□□□□ 0.59
Slc1a4O35874 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.72■□□□□ 0.59
Slc1a4O35874 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a4O35874 Rps4l-201ENSMUST00000071745 943 ntBASIC18.72■□□□□ 0.59
Slc1a4O35874 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a4O35874 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a4O35874 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a4O35874 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.72■□□□□ 0.59
Slc1a4O35874 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a4O35874 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a4O35874 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a4O35874 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Slc1a4O35874 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a4O35874 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc1a4O35874 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc1a4O35874 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc1a4O35874 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc1a4O35874 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc1a4O35874 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Slc1a4O35874 Gm12497-201ENSMUST00000138778 237 ntBASIC18.71■□□□□ 0.59
Slc1a4O35874 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.71■□□□□ 0.59
Slc1a4O35874 Gm44357-201ENSMUST00000195897 142 ntBASIC18.71■□□□□ 0.59
Slc1a4O35874 Gm19658-201ENSMUST00000196231 138 ntBASIC18.71■□□□□ 0.59
Slc1a4O35874 Gm44367-201ENSMUST00000196836 138 ntBASIC18.71■□□□□ 0.59
Slc1a4O35874 Gm44350-201ENSMUST00000197197 138 ntBASIC18.71■□□□□ 0.59
Slc1a4O35874 Gm44390-201ENSMUST00000197533 144 ntBASIC18.71■□□□□ 0.59
Slc1a4O35874 Gm44313-201ENSMUST00000198018 138 ntBASIC18.71■□□□□ 0.59
Slc1a4O35874 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slc1a4O35874 Gm44486-201ENSMUST00000198508 138 ntBASIC18.71■□□□□ 0.59
Slc1a4O35874 Gm44314-201ENSMUST00000199263 138 ntBASIC18.71■□□□□ 0.59
Slc1a4O35874 Gm44394-201ENSMUST00000199558 138 ntBASIC18.71■□□□□ 0.59
Slc1a4O35874 Gm44484-201ENSMUST00000199873 138 ntBASIC18.71■□□□□ 0.59
Slc1a4O35874 Gm44466-201ENSMUST00000200264 138 ntBASIC18.71■□□□□ 0.59
Slc1a4O35874 Gm44359-201ENSMUST00000200671 138 ntBASIC18.71■□□□□ 0.59
Slc1a4O35874 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.71■□□□□ 0.59
Slc1a4O35874 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.71■□□□□ 0.59
Slc1a4O35874 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc1a4O35874 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slc1a4O35874 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc1a4O35874 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc1a4O35874 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc1a4O35874 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc1a4O35874 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Slc1a4O35874 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.71■□□□□ 0.59
Slc1a4O35874 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slc1a4O35874 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc1a4O35874 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Slc1a4O35874 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.7■□□□□ 0.58
Slc1a4O35874 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.7■□□□□ 0.58
Slc1a4O35874 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc1a4O35874 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc1a4O35874 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.7■□□□□ 0.58
Slc1a4O35874 Gm4459-201ENSMUST00000118750 468 ntBASIC18.7■□□□□ 0.58
Slc1a4O35874 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Slc1a4O35874 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
Slc1a4O35874 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Slc1a4O35874 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc1a4O35874 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc1a4O35874 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc1a4O35874 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc1a4O35874 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Slc1a4O35874 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc1a4O35874 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc1a4O35874 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc1a4O35874 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
Slc1a4O35874 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.69■□□□□ 0.58
Slc1a4O35874 Gm6376-201ENSMUST00000209407 580 ntBASIC18.69■□□□□ 0.58
Slc1a4O35874 Gm6296-201ENSMUST00000222599 943 ntBASIC18.69■□□□□ 0.58
Slc1a4O35874 Mzt1-203ENSMUST00000227948 952 ntBASIC18.69■□□□□ 0.58
Slc1a4O35874 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Slc1a4O35874 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
Slc1a4O35874 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms