Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Gm18666-201ENSMUST00000190039 958 ntBASIC12.5□□□□□ -0.41
Tnfsf11O35235 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Tnfsf11O35235 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.5□□□□□ -0.41
Tnfsf11O35235 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Tnfsf11O35235 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.49□□□□□ -0.41
Tnfsf11O35235 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Tnfsf11O35235 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf11O35235 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Tnfsf11O35235 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.48□□□□□ -0.41
Tnfsf11O35235 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 BC037039-201ENSMUST00000192003 2205 ntBASIC12.48□□□□□ -0.41
Tnfsf11O35235 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Gm43183-201ENSMUST00000200632 547 ntBASIC12.48□□□□□ -0.41
Tnfsf11O35235 Gm20049-201ENSMUST00000219950 730 ntBASIC12.48□□□□□ -0.41
Tnfsf11O35235 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.48□□□□□ -0.41
Tnfsf11O35235 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms