Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hdac1O09106 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hdac1O09106 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hdac1O09106 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hdac1O09106 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.02■□□□□ 0.64
Hdac1O09106 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.02■□□□□ 0.64
Hdac1O09106 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.02■□□□□ 0.64
Hdac1O09106 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hdac1O09106 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hdac1O09106 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hdac1O09106 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hdac1O09106 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hdac1O09106 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hdac1O09106 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hdac1O09106 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hdac1O09106 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hdac1O09106 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Hdac1O09106 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hdac1O09106 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.02■□□□□ 0.63
Hdac1O09106 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac1O09106 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Hdac1O09106 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac1O09106 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac1O09106 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Hdac1O09106 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac1O09106 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Hdac1O09106 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac1O09106 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac1O09106 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac1O09106 Gm37722-201ENSMUST00000193757 208 ntBASIC19.01■□□□□ 0.63
Hdac1O09106 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.01■□□□□ 0.63
Hdac1O09106 Gm44430-201ENSMUST00000203376 995 ntBASIC19.01■□□□□ 0.63
Hdac1O09106 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac1O09106 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Hdac1O09106 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Hdac1O09106 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac1O09106 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac1O09106 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac1O09106 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Hdac1O09106 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac1O09106 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Hdac1O09106 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac1O09106 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac1O09106 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac1O09106 Gm43598-201ENSMUST00000202482 2479 ntBASIC19■□□□□ 0.63
Hdac1O09106 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC19■□□□□ 0.63
Hdac1O09106 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC19■□□□□ 0.63
Hdac1O09106 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC19■□□□□ 0.63
Hdac1O09106 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac1O09106 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac1O09106 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac1O09106 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hdac1O09106 Mir5130-201ENSMUST00000175160 84 ntBASIC19■□□□□ 0.63
Hdac1O09106 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19■□□□□ 0.63
Hdac1O09106 Gm45058-201ENSMUST00000205810 766 ntBASIC19■□□□□ 0.63
Hdac1O09106 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac1O09106 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac1O09106 AC159205.6-201ENSMUST00000224935 887 ntBASIC19■□□□□ 0.63
Hdac1O09106 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac1O09106 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac1O09106 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hdac1O09106 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Hdac1O09106 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac1O09106 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac1O09106 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hdac1O09106 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac1O09106 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac1O09106 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac1O09106 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac1O09106 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac1O09106 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac1O09106 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac1O09106 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac1O09106 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.99■□□□□ 0.63
Hdac1O09106 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac1O09106 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac1O09106 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.99■□□□□ 0.63
Hdac1O09106 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac1O09106 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac1O09106 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.99■□□□□ 0.63
Hdac1O09106 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.99■□□□□ 0.63
Hdac1O09106 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac1O09106 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac1O09106 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac1O09106 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Hdac1O09106 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac1O09106 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac1O09106 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac1O09106 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.99■□□□□ 0.63
Hdac1O09106 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac1O09106 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac1O09106 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac1O09106 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac1O09106 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac1O09106 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac1O09106 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac1O09106 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac1O09106 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Hdac1O09106 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac1O09106 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms