Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Gm11236J3QMS7 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.65■□□□□ 0.26
Gm11236J3QMS7 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.65■□□□□ 0.26
Gm11236J3QMS7 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11236J3QMS7 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11236J3QMS7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.65■□□□□ 0.26
Gm11236J3QMS7 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Gm11236J3QMS7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11236J3QMS7 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Gm11236J3QMS7 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.65■□□□□ 0.26
Gm11236J3QMS7 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.65■□□□□ 0.26
Gm11236J3QMS7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Gm11236J3QMS7 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11236J3QMS7 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11236J3QMS7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11236J3QMS7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11236J3QMS7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11236J3QMS7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Gm11236J3QMS7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11236J3QMS7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11236J3QMS7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11236J3QMS7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11236J3QMS7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11236J3QMS7 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Gm11236J3QMS7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11236J3QMS7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11236J3QMS7 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11236J3QMS7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11236J3QMS7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11236J3QMS7 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.64■□□□□ 0.25
Gm11236J3QMS7 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Gm11236J3QMS7 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.64■□□□□ 0.25
Gm11236J3QMS7 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11236J3QMS7 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.64■□□□□ 0.25
Gm11236J3QMS7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11236J3QMS7 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11236J3QMS7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11236J3QMS7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11236J3QMS7 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.64■□□□□ 0.25
Gm11236J3QMS7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11236J3QMS7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11236J3QMS7 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11236J3QMS7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11236J3QMS7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11236J3QMS7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Gm11236J3QMS7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11236J3QMS7 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11236J3QMS7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.64■□□□□ 0.25
Gm11236J3QMS7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11236J3QMS7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Gm11236J3QMS7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.63■□□□□ 0.25
Gm11236J3QMS7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gm11236J3QMS7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Gm11236J3QMS7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm11236J3QMS7 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm11236J3QMS7 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm11236J3QMS7 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm11236J3QMS7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gm11236J3QMS7 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Gm11236J3QMS7 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.63■□□□□ 0.25
Gm11236J3QMS7 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm11236J3QMS7 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gm11236J3QMS7 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.63■□□□□ 0.25
Gm11236J3QMS7 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm11236J3QMS7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm11236J3QMS7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm11236J3QMS7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gm11236J3QMS7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm11236J3QMS7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm11236J3QMS7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm11236J3QMS7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm11236J3QMS7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms