Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm3139J3QK78 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm3139J3QK78 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Gm3139J3QK78 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm3139J3QK78 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm3139J3QK78 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm3139J3QK78 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.89■□□□□ 0.13
Gm3139J3QK78 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm3139J3QK78 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.89■□□□□ 0.13
Gm3139J3QK78 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm3139J3QK78 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Gm3139J3QK78 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Gm3139J3QK78 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gm3139J3QK78 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.89■□□□□ 0.13
Gm3139J3QK78 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm3139J3QK78 Gm6257-201ENSMUST00000163864 910 ntBASIC15.89■□□□□ 0.13
Gm3139J3QK78 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Gm3139J3QK78 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
Gm3139J3QK78 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
Gm3139J3QK78 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
Gm3139J3QK78 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.89■□□□□ 0.13
Gm3139J3QK78 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.89■□□□□ 0.13
Gm3139J3QK78 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm3139J3QK78 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Gm3139J3QK78 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gm3139J3QK78 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.89■□□□□ 0.13
Gm3139J3QK78 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm3139J3QK78 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm3139J3QK78 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm3139J3QK78 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm3139J3QK78 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Gm3139J3QK78 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gm3139J3QK78 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm3139J3QK78 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Gm3139J3QK78 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm3139J3QK78 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm3139J3QK78 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm3139J3QK78 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.88■□□□□ 0.13
Gm3139J3QK78 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.88■□□□□ 0.13
Gm3139J3QK78 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm3139J3QK78 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Gm3139J3QK78 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm3139J3QK78 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm3139J3QK78 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Gm3139J3QK78 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.87■□□□□ 0.13
Gm3139J3QK78 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Gm3139J3QK78 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm3139J3QK78 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm3139J3QK78 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm3139J3QK78 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Gm3139J3QK78 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Gm3139J3QK78 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.87■□□□□ 0.13
Gm3139J3QK78 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm3139J3QK78 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Gm3139J3QK78 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.87■□□□□ 0.13
Gm3139J3QK78 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.87■□□□□ 0.13
Gm3139J3QK78 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.87■□□□□ 0.13
Gm3139J3QK78 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.87■□□□□ 0.13
Gm3139J3QK78 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.87■□□□□ 0.13
Gm3139J3QK78 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Gm3139J3QK78 Gm18622-201ENSMUST00000219361 595 ntBASIC15.87■□□□□ 0.13
Gm3139J3QK78 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm3139J3QK78 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.87■□□□□ 0.13
Gm3139J3QK78 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm3139J3QK78 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm3139J3QK78 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Gm3139J3QK78 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Gm3139J3QK78 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm3139J3QK78 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm3139J3QK78 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Gm3139J3QK78 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Gm3139J3QK78 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Gm3139J3QK78 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms