Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Gm14862-201ENSMUST00000115553 870 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Gm28631-201ENSMUST00000190740 334 ntBASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Gm37684-201ENSMUST00000192779 355 ntBASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Gm18387-201ENSMUST00000220333 702 ntBASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Nkx1-1G3UXB3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx1-1G3UXB3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Nkx1-1G3UXB3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Nkx1-1G3UXB3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Nkx1-1G3UXB3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx1-1G3UXB3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx1-1G3UXB3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx1-1G3UXB3 Gm11478-201ENSMUST00000117851 599 ntBASIC18.27■□□□□ 0.52
Nkx1-1G3UXB3 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Nkx1-1G3UXB3 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx1-1G3UXB3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC18.27■□□□□ 0.52
Nkx1-1G3UXB3 Mir7684-201ENSMUST00000183858 60 ntBASIC18.27■□□□□ 0.52
Nkx1-1G3UXB3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC18.27■□□□□ 0.52
Nkx1-1G3UXB3 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx1-1G3UXB3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx1-1G3UXB3 Gm19253-201ENSMUST00000204279 307 ntBASIC18.27■□□□□ 0.52
Nkx1-1G3UXB3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.27■□□□□ 0.52
Nkx1-1G3UXB3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Nkx1-1G3UXB3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx1-1G3UXB3 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.27■□□□□ 0.51
Nkx1-1G3UXB3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nkx1-1G3UXB3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nkx1-1G3UXB3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nkx1-1G3UXB3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nkx1-1G3UXB3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx1-1G3UXB3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx1-1G3UXB3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Nkx1-1G3UXB3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Nkx1-1G3UXB3 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.26■□□□□ 0.51
Nkx1-1G3UXB3 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.26■□□□□ 0.51
Nkx1-1G3UXB3 Gm27306-201ENSMUST00000183970 107 ntBASIC18.26■□□□□ 0.51
Nkx1-1G3UXB3 AC153968.2-201ENSMUST00000215579 1140 ntBASIC18.26■□□□□ 0.51
Nkx1-1G3UXB3 CT009754.4-201ENSMUST00000221430 565 ntBASIC18.26■□□□□ 0.51
Nkx1-1G3UXB3 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx1-1G3UXB3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx1-1G3UXB3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx1-1G3UXB3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx1-1G3UXB3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx1-1G3UXB3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.26■□□□□ 0.51
Nkx1-1G3UXB3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Nkx1-1G3UXB3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm22065-201ENSMUST00000103753 110 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm22066-201ENSMUST00000103761 110 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm24932-201ENSMUST00000103763 110 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm24115-201ENSMUST00000103799 110 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm22190-201ENSMUST00000103827 110 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm22191-201ENSMUST00000103831 110 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm24721-201ENSMUST00000103849 110 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm28018-201ENSMUST00000103869 110 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm26399-201ENSMUST00000103937 110 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm25349-201ENSMUST00000177728 110 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm23616-201ENSMUST00000177797 110 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm25871-201ENSMUST00000177816 110 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm24752-201ENSMUST00000178240 110 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm24496-201ENSMUST00000178287 110 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm25649-201ENSMUST00000178476 110 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm25548-201ENSMUST00000178681 110 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm23147-201ENSMUST00000178841 110 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm26095-201ENSMUST00000179270 110 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm22171-201ENSMUST00000179283 110 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm23936-201ENSMUST00000179354 110 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm22619-201ENSMUST00000179516 110 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm25255-201ENSMUST00000179579 110 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm24755-201ENSMUST00000179691 110 ntBASIC18.25■□□□□ 0.51
Nkx1-1G3UXB3 Gm26506-201ENSMUST00000179692 110 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms