Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC19.14■□□□□ 0.65
NpcdF8VQB8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.14■□□□□ 0.65
NpcdF8VQB8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.14■□□□□ 0.65
NpcdF8VQB8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NpcdF8VQB8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NpcdF8VQB8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NpcdF8VQB8 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NpcdF8VQB8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NpcdF8VQB8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NpcdF8VQB8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.14■□□□□ 0.65
NpcdF8VQB8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NpcdF8VQB8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NpcdF8VQB8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NpcdF8VQB8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
NpcdF8VQB8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NpcdF8VQB8 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NpcdF8VQB8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
NpcdF8VQB8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NpcdF8VQB8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NpcdF8VQB8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NpcdF8VQB8 Gm23547-201ENSMUST00000158210 271 ntBASIC19.13■□□□□ 0.65
NpcdF8VQB8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NpcdF8VQB8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
NpcdF8VQB8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NpcdF8VQB8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
NpcdF8VQB8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.13■□□□□ 0.65
NpcdF8VQB8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NpcdF8VQB8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NpcdF8VQB8 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
NpcdF8VQB8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NpcdF8VQB8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NpcdF8VQB8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
NpcdF8VQB8 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC19.12■□□□□ 0.65
NpcdF8VQB8 Gm17968-201ENSMUST00000194902 784 ntBASIC19.12■□□□□ 0.65
NpcdF8VQB8 Gm44335-201ENSMUST00000196879 141 ntBASIC19.12■□□□□ 0.65
NpcdF8VQB8 Gm44297-201ENSMUST00000198304 141 ntBASIC19.12■□□□□ 0.65
NpcdF8VQB8 Gm44346-201ENSMUST00000198851 141 ntBASIC19.12■□□□□ 0.65
NpcdF8VQB8 AC155252.2-201ENSMUST00000226946 680 ntBASIC19.12■□□□□ 0.65
NpcdF8VQB8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NpcdF8VQB8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NpcdF8VQB8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NpcdF8VQB8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
NpcdF8VQB8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NpcdF8VQB8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.11■□□□□ 0.65
NpcdF8VQB8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NpcdF8VQB8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NpcdF8VQB8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NpcdF8VQB8 Fgf17-202ENSMUST00000227123 1336 ntBASIC19.11■□□□□ 0.65
NpcdF8VQB8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
NpcdF8VQB8 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC19.11■□□□□ 0.65
NpcdF8VQB8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.11■□□□□ 0.65
NpcdF8VQB8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NpcdF8VQB8 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC19.11■□□□□ 0.65
NpcdF8VQB8 CT025535.1-201ENSMUST00000227172 491 ntBASIC19.11■□□□□ 0.65
NpcdF8VQB8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NpcdF8VQB8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NpcdF8VQB8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NpcdF8VQB8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NpcdF8VQB8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NpcdF8VQB8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NpcdF8VQB8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NpcdF8VQB8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NpcdF8VQB8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NpcdF8VQB8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC19.1■□□□□ 0.65
NpcdF8VQB8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NpcdF8VQB8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NpcdF8VQB8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NpcdF8VQB8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NpcdF8VQB8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NpcdF8VQB8 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NpcdF8VQB8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.1■□□□□ 0.65
NpcdF8VQB8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NpcdF8VQB8 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC19.1■□□□□ 0.65
NpcdF8VQB8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
NpcdF8VQB8 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NpcdF8VQB8 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NpcdF8VQB8 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC19.1■□□□□ 0.65
NpcdF8VQB8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NpcdF8VQB8 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC19.1■□□□□ 0.65
NpcdF8VQB8 AC140397.2-201ENSMUST00000224213 834 ntBASIC19.1■□□□□ 0.65
NpcdF8VQB8 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NpcdF8VQB8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NpcdF8VQB8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NpcdF8VQB8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NpcdF8VQB8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NpcdF8VQB8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NpcdF8VQB8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NpcdF8VQB8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NpcdF8VQB8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.09■□□□□ 0.65
NpcdF8VQB8 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.09■□□□□ 0.65
NpcdF8VQB8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NpcdF8VQB8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NpcdF8VQB8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.09■□□□□ 0.65
NpcdF8VQB8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NpcdF8VQB8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NpcdF8VQB8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NpcdF8VQB8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NpcdF8VQB8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NpcdF8VQB8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
NpcdF8VQB8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms