Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc188F6WEU2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc188F6WEU2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc188F6WEU2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.08■□□□□ 0.16
Ccdc188F6WEU2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Ccdc188F6WEU2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc188F6WEU2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc188F6WEU2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc188F6WEU2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc188F6WEU2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc188F6WEU2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc188F6WEU2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc188F6WEU2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc188F6WEU2 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.07■□□□□ 0.16
Ccdc188F6WEU2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Ccdc188F6WEU2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc188F6WEU2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.07■□□□□ 0.16
Ccdc188F6WEU2 Gm6266-201ENSMUST00000203844 806 ntBASIC16.07■□□□□ 0.16
Ccdc188F6WEU2 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.07■□□□□ 0.16
Ccdc188F6WEU2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc188F6WEU2 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc188F6WEU2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc188F6WEU2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc188F6WEU2 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc188F6WEU2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc188F6WEU2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ccdc188F6WEU2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ccdc188F6WEU2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc188F6WEU2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc188F6WEU2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ccdc188F6WEU2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc188F6WEU2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc188F6WEU2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc188F6WEU2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc188F6WEU2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc188F6WEU2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc188F6WEU2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.06■□□□□ 0.16
Ccdc188F6WEU2 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc188F6WEU2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc188F6WEU2 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc188F6WEU2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc188F6WEU2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc188F6WEU2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc188F6WEU2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc188F6WEU2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc188F6WEU2 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Ccdc188F6WEU2 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc188F6WEU2 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC16.06■□□□□ 0.16
Ccdc188F6WEU2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc188F6WEU2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc188F6WEU2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc188F6WEU2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc188F6WEU2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc188F6WEU2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc188F6WEU2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc188F6WEU2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc188F6WEU2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc188F6WEU2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc188F6WEU2 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.05■□□□□ 0.16
Ccdc188F6WEU2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc188F6WEU2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ccdc188F6WEU2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.05■□□□□ 0.16
Ccdc188F6WEU2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc188F6WEU2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc188F6WEU2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc188F6WEU2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc188F6WEU2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc188F6WEU2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc188F6WEU2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.05■□□□□ 0.16
Ccdc188F6WEU2 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.05■□□□□ 0.16
Ccdc188F6WEU2 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc188F6WEU2 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc188F6WEU2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.05■□□□□ 0.16
Ccdc188F6WEU2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc188F6WEU2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc188F6WEU2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc188F6WEU2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc188F6WEU2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Gm28631-201ENSMUST00000190740 334 ntBASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms